RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 VSX1Q9NZR4 365 aaPredicted RBP10.16□□□□□ -0.78
MED28-203ENST00000503945 IMPA2O14732 288 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 DOK2O60496 412 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 ADH4P08319 380 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 TNFRSF1AP19438 455 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 NOS3P29474 1203 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 MSX2P35548 267 aaPredicted RBP10.15□□□□□ -0.78
MED28-203ENST00000503945 CDKN2AP42771 156 aaKnown RBP10.15□□□□□ -0.78
MED28-203ENST00000503945 LIMS1P48059 325 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 MNAT1P51948 309 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 TNFAIP6P98066 277 aaPredicted RBP10.15□□□□□ -0.78
MED28-203ENST00000503945 CDK5R2Q13319 367 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 KCNMB1Q16558 191 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 SPATS1Q496A3 300 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 C1orf94Q6P1W5 598 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 SHQ1Q6PI26 577 aaKnown RBP10.15□□□□□ -0.78
MED28-203ENST00000503945 DNM1P34Q6PK57 102 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 THSD4Q6ZMP0 1018 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 RFPL4BQ6ZWI9 263 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 VASH1Q7L8A9 365 aaPredicted RBP10.15□□□□□ -0.78
MED28-203ENST00000503945 PGAM4Q8N0Y7 254 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 FAM86B1Q8N7N1 296 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 NPEPL1Q8NDH3 523 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 GJC3Q8NFK1 279 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 OR1F12Q8NHA8 337 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 HAVCR1Q96D42 359 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 NSMCE2Q96MF7 247 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 CDADC1Q9BWV3 514 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 METTL17Q9H7H0 456 aaPredicted RBP10.15□□□□□ -0.78
MED28-203ENST00000503945 ASH2LQ9UBL3 628 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 TAGLN3Q9UI15 199 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 MAGEL2Q9UJ55 1249 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 B9D1Q9UPM9 204 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 ARL2BPQ9Y2Y0 163 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 STARD10Q9Y365 291 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 WIPI2Q9Y4P8 454 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 CACNG2Q9Y698 323 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 V9GYQ6 96 aa10.15□□□□□ -0.78
MED28-203ENST00000503945 ZSCAN5BA6NJL1 495 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 SURF4O15260 269 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 PLPP2O43688 288 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 IDH3BO43837 385 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 OR10H3O60404 316 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 DCTN3O75935 186 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 KRT36O76013 467 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 UBOX5O94941 541 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 TXNDC12O95881 172 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 RENP00797 406 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 FABP3P05413 133 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 CD55P08174 381 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 SBK2P0C263 348 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 SLC6A6P31641 620 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 GNGT1P63211 74 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 MXRA7P84157 204 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 SPIBQ01892 262 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 PGM2L1Q6PCE3 622 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 C16orf89Q6UX73 402 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 PIGWQ7Z7B1 504 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 JAZF1Q86VZ6 243 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 OR2Z1Q8NG97 314 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 DHRS1Q96LJ7 313 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 SAMD8Q96LT4 415 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 DCLRE1CQ96SD1 692 aaKnown RBP10.14□□□□□ -0.79
MED28-203ENST00000503945 IFT27Q9BW83 186 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 IL1RAPQ9NPH3 570 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 CD300AQ9UGN4 299 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 PURGQ9UJV8 347 aaKnown RBP10.14□□□□□ -0.79
MED28-203ENST00000503945 PCDHB10Q9UN67 800 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 POLR1DQ9Y2S0 133 aa10.14□□□□□ -0.79
MED28-203ENST00000503945 A0A0A6YYJ9 748 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 A0A0G2JMP0 313 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 A0A0X1KG70 313 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 ISPDA4D126 451 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 OR6C6A6NF89 314 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 ARPC3O15145 178 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 RER1O15258 196 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 PNPP00491 289 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 RAC2P15153 192 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 KITLGP21583 273 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 RGS6P49758 472 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 CCDC92Q53HC0 331 aaPredicted RBP10.13□□□□□ -0.79
MED28-203ENST00000503945 SLC27A4Q6P1M0 643 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 LEG1Q6P5S2 330 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 PTCHD4Q6ZW05 846 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 DEFB107AQ8IZN7 70 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 ATG16L2Q8NAA4 619 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 OR4M2Q8NGB6 313 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 OR2AJ1Q8NGZ0 328 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 OR4K13Q8NH42 304 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 GNPDA2Q8TDQ7 276 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 ST7LQ8TDW4 575 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 SLC7A6Q92536 515 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 ZNF582Q96NG8 517 aaPredicted RBP10.13□□□□□ -0.79
MED28-203ENST00000503945 NMNAT3Q96T66 252 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 GPA33Q99795 319 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 GAL3ST1Q99999 423 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 FUZQ9BT04 418 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 OR52D1Q9H346 318 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 ARL8BQ9NVJ2 186 aa10.13□□□□□ -0.79
MED28-203ENST00000503945 UBAP1Q9NZ09 502 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms