RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 PSMB10P40306 273 aa13.07□□□□□ -0.32
PDLIM7-210ENST00000503827 RPL18Q07020 188 aaKnown RBP13.07□□□□□ -0.32
PDLIM7-210ENST00000503827 GCNT6Q5T4J0 391 aa13.07□□□□□ -0.32
PDLIM7-210ENST00000503827 C11orf44Q8N8P7 122 aa13.07□□□□□ -0.32
PDLIM7-210ENST00000503827 OR13G1Q8NGZ3 307 aa13.07□□□□□ -0.32
PDLIM7-210ENST00000503827 PHF21AQ96BD5 680 aa13.07□□□□□ -0.32
PDLIM7-210ENST00000503827 SIRPDQ9H106 197 aa13.07□□□□□ -0.32
PDLIM7-210ENST00000503827 INIPQ9NRY2 104 aa13.07□□□□□ -0.32
PDLIM7-210ENST00000503827 ERVK-18Q9QC07 812 aa13.07□□□□□ -0.32
PDLIM7-210ENST00000503827 HAO1Q9UJM8 370 aa13.07□□□□□ -0.32
PDLIM7-210ENST00000503827 IGHV3-64DA0A0J9YX35 117 aa13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 LOC100653049A0A140TA62 436 aa13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 CPSF4LA6NMK7 179 aaKnown RBP13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 KRT34O76011 436 aa13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 FBP1P09467 338 aa13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 COX5BP10606 129 aa13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 IDO1P14902 403 aa13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 RAC2P15153 192 aa13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 ERFP50548 548 aa13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 C11orf88Q6PI97 169 aa13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 SLC25A47Q6Q0C1 308 aa13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 SYT9Q86SS6 491 aa13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 ARMC8Q8IUR7 673 aa13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 SPERTQ8NA61 448 aa13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 OR8G5Q8NG78 346 aa13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 OR4S1Q8NGB4 309 aa13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 CFHR4Q92496 578 aa13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 HDAC2Q92769 488 aaKnown RBP13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 NMD3Q96D46 503 aaKnown RBP13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 PAIP1Q9H074 479 aaKnown RBP13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 TOR3AQ9H497 397 aa13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 PNPOQ9NVS9 261 aa13.06□□□□□ -0.32
PDLIM7-210ENST00000503827 C12orf71A8MTZ7 269 aa13.05□□□□□ -0.32
PDLIM7-210ENST00000503827 RNASEK-C17orf49H0YIS7 233 aa13.05□□□□□ -0.32
PDLIM7-210ENST00000503827 M0R3H8 397 aa13.05□□□□□ -0.32
PDLIM7-210ENST00000503827 VIMP08670 466 aaKnown RBP13.05□□□□□ -0.32
PDLIM7-210ENST00000503827 COX10Q12887 443 aa13.05□□□□□ -0.32
PDLIM7-210ENST00000503827 ENTPD8Q5MY95 495 aa13.05□□□□□ -0.32
PDLIM7-210ENST00000503827 ARMC4Q5T2S8 1044 aa13.05□□□□□ -0.32
PDLIM7-210ENST00000503827 SLC30A8Q8IWU4 369 aa13.05□□□□□ -0.32
PDLIM7-210ENST00000503827 PDZD9Q8IXQ8 264 aa13.05□□□□□ -0.32
PDLIM7-210ENST00000503827 PIP4P2Q8N4L2 257 aa13.05□□□□□ -0.32
PDLIM7-210ENST00000503827 ITPKCQ96DU7 683 aa13.05□□□□□ -0.32
PDLIM7-210ENST00000503827 RBP7Q96R05 134 aa13.05□□□□□ -0.32
PDLIM7-210ENST00000503827 MMADHCQ9H3L0 296 aaPredicted RBP13.05□□□□□ -0.32
PDLIM7-210ENST00000503827 ZNRD1Q9P1U0 126 aa13.05□□□□□ -0.32
PDLIM7-210ENST00000503827 SLC7A7Q9UM01 511 aa13.05□□□□□ -0.32
PDLIM7-210ENST00000503827 ANGPT4Q9Y264 503 aa13.05□□□□□ -0.32
PDLIM7-210ENST00000503827 F5H5P2 479 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 BIRC5O15392 142 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 TYROBPO43914 113 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 SLC6A2P23975 617 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 AQP1P29972 269 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 PMELP40967 661 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 HTR5AP47898 357 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 POLR2JP52435 117 aaKnown RBP13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 ARF6P62330 175 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 SCARB2Q14108 478 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 KCNJ8Q15842 424 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 FOXB2Q5VYV0 432 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 GOLGA6L1Q8N7Z2 621 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 C19orf18Q8NEA5 215 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 OR11L1Q8NGX0 322 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 FNDC8Q8TC99 324 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 ADAMTS16Q8TE57 1224 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 NPRL2Q8WTW4 380 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 GTF2H4Q92759 462 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 MPP4Q96JB8 637 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 ZNF582Q96NG8 517 aaPredicted RBP13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 WACQ9BTA9 647 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 PPA2Q9H2U2 334 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 WDR55Q9H6Y2 383 aaPredicted RBP13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 ZIM2Q9NZV7 527 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 LGALS13Q9UHV8 139 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 TMCC3Q9ULS5 477 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 FOXJ3Q9UPW0 622 aa13.04□□□□□ -0.32
PDLIM7-210ENST00000503827 A0A1W2PPL8 197 aa13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 MLNRO43193 412 aa13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 DOK2O60496 412 aa13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 LYPD3O95274 346 aa13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 THY1P04216 161 aa13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 FUT1P19526 365 aa13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 MSR1P21757 451 aa13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 AQP2P41181 271 aa13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 EFNB2P52799 333 aa13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 ENDOGQ14249 297 aaKnown RBP13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 NXNQ6DKJ4 435 aa13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 OR2T2Q6IF00 324 aa13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 C1orf94Q6P1W5 598 aa13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 CCBE1Q6UXH8 406 aaPredicted RBP13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 CLDN22Q8N7P3 220 aa13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 EIF1ADQ8N9N8 165 aaKnown RBP13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 SMYD1Q8NB12 490 aa13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 OR6T1Q8NGN1 323 aa13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 OR5R1Q8NH85 324 aa13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 ZNF426Q9BUY5 554 aa13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 CTSZQ9UBR2 303 aa13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 SIGLEC9Q9Y336 463 aa13.03□□□□□ -0.32
PDLIM7-210ENST00000503827 ELOVL7A1L3X0 281 aa13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 TRAPPC13A5PLN9 417 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms