RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 GABRG3Q99928 467 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 GPR35Q9HC97 309 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 ERVK-5Q9HDB9 667 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 ANKEF1Q9NU02 776 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 MAT2BQ9NZL9 334 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 CFAP97Q9P2B7 532 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 STX8Q9UNK0 236 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 STRAPQ9Y3F4 350 aaKnown RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 SRPRBQ9Y5M8 271 aaKnown RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 RLFQ13129 1914 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 TRAV10A0A0B4J240 114 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 C3orf85A0A1B0GTC6 90 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 NKX2-6A6NCS4 301 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 LRRIQ3A6PVS8 624 aaPredicted RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 PRR32B1ATL7 298 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 K7ERU9 68 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 DCTN6O00399 190 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 SIGLEC5O15389 551 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ANGPTL7O43827 346 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 MFSD11O43934 449 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 TBCAO75347 108 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 SIX6O95475 246 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 FSTL3O95633 263 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 SOD2P04179 222 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 BCHEP06276 602 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ARL14EPLP0DKL9 152 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ACRP10323 421 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 SLC2A1P11166 492 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 MGMTP16455 207 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 RAB4AP20338 218 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 COX5AP20674 150 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 TAF1P21675 1872 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 SPINT3P49223 89 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 RAD23AP54725 363 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 RAD23BP54727 409 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 PJVKQ0ZLH3 352 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 TFDP2Q14188 446 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 SHROOM1Q2M3G4 852 aaPredicted RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 MOXD1Q6UVY6 613 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 TMUB2Q71RG4 321 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ANKRD33Q7Z3H0 272 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CPEB2Q7Z5Q1 589 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 GALNT5Q7Z7M9 940 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 C1QL4Q86Z23 238 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 IQCF2Q8IXL9 164 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 Q8N402 240 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 KREMEN2Q8NCW0 462 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 OR5W2Q8NH69 310 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CCDC26Q8TAB7 109 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ELP5Q8TE02 316 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CHURC1Q8WUH1 139 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 FRZBQ92765 325 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 P3H4Q92791 437 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 RAB39BQ96DA2 213 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CCDC126Q96EE4 140 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 MFSD3Q96ES6 412 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CERS2Q96G23 380 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ZNF670Q9BS34 389 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 BTBD10Q9BSF8 475 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 GON7Q9BXV9 100 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 MRPL13Q9BYD1 178 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 DERL2Q9GZP9 239 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 PUS7LQ9H0K6 701 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 BLZF1Q9H2G9 400 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 METTL14Q9HCE5 456 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 TMEM138Q9NPI0 162 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 HEYLQ9NQ87 328 aaPredicted RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 CISHQ9NSE2 258 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 DNAJC11Q9NVH1 559 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 HRASLS2Q9NWW9 162 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 SMARCAL1Q9NZC9 954 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CCDC59Q9P031 241 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 ABI3Q9P2A4 366 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 NENFQ9UMX5 172 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 PSG11Q9UQ72 335 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ORC6Q9Y5N6 252 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ZNF706Q9Y5V0 76 aaPredicted RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 KIAA1217Q5T5P2 1943 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 HEATR1Q9H583 2144 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 A0A1W2PPI3 338 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 TCRBV5S4A2TA0A5A2 114 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 OR5K3A6NET4 321 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CHKB-CPT1BH3BT56 60 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 OGG1O15527 345 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 PDPK1O15530 556 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CTDNEP1O95476 244 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 OLFM2O95897 454 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 PPP1R17O96001 155 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 RNF224P0DH78 156 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ZNF43P17038 809 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 FUT3P21217 361 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ATP5A1P25705 553 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 KIR2DS2P43631 304 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 GPR4P46093 362 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 GLUD2P49448 558 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 GATMP50440 423 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 FUT6P51993 359 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 MAP2K6P52564 334 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 BSPH1Q075Z2 132 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ZNF235Q14590 738 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms