RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, human

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-223	ENST00000497318	TMEM246	Q9BRR3	403 aa		13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	PCGF1	Q9BSM1	259 aa		13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	ZNF426	Q9BUY5	554 aa		13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	ALG12	Q9BV10	488 aa		13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	TANC2	Q9HCD6	1990 aa		13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	TRBV5-3	A0A0A0MS03	114 aa		13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318	PHYH	O14832	338 aa		13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318	GPR137B	O60478	399 aa		13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318	ZNF205	O95201	554 aa		13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318	LYPD3	O95274	346 aa		13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318	MT-ND1	P03886	318 aa		13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318	LIPF	P07098	398 aa		13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318	CSF1	P09603	554 aa		13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318	CD247	P20963	164 aa		13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318	FMOD	Q06828	376 aa		13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318	DUSP7	Q16829	419 aa		13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318	AGBL2	Q5U5Z8	902 aa		13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318	CD276	Q5ZPR3	534 aa		13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318	SLC25A47	Q6Q0C1	308 aa		13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318	SLC30A8	Q8IWU4	369 aa		13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318	OR13G1	Q8NGZ3	307 aa		13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318	HDAC2	Q92769	488 aa	Known RBP	13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318	SPDL1	Q96EA4	605 aa		13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318	C7orf26	Q96N11	449 aa		13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318	TXNIP	Q9H3M7	391 aa		13.81	□□□□□ -0.2
SUPT20H-223	ENST00000497318		M0QX08	132 aa		13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	POLR3G	O15318	223 aa	Predicted RBP	13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	OR7A10	O76100	309 aa		13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	THY1	P04216	161 aa		13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	THRB	P10828	461 aa		13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	IRF2	P14316	349 aa		13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	RAC2	P15153	192 aa		13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	MSR1	P21757	451 aa		13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	MRPL19	P49406	292 aa	Known RBP	13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	ZNF181	Q2M3W8	571 aa		13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	ZNF404	Q494X3	552 aa		13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	AGK	Q53H12	422 aa		13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	RUNDC3A	Q59EK9	446 aa		13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	GDPGP1	Q6ZNW5	385 aa		13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	SGTB	Q96EQ0	304 aa		13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	MEGF10	Q96KG7	1140 aa		13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	DPAGT1	Q9H3H5	408 aa		13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	MEPE	Q9NQ76	525 aa	Predicted RBP	13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	ACOXL	Q9NUZ1	547 aa		13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	STARD10	Q9Y365	291 aa		13.8	□□□□□ -0.2
SUPT20H-223	ENST00000497318	IGKV1D-43	A0A0B4J1Z2	117 aa		13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318	PIP5K1C	O60331	668 aa		13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318	TOX4	O94842	621 aa		13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318	CYB5R3	P00387	301 aa	Predicted RBP	13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318	IGF2	P01344	180 aa		13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318	RBM34	P42696	430 aa	Known RBP	13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318	HTR5A	P47898	357 aa		13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318	NPY4R	P50391	375 aa		13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318	PCBP3	P57721	371 aa	Known RBP	13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318	SCRN3	Q0VDG4	424 aa		13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318	SELPLG	Q14242	412 aa		13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318	WDR25	Q64LD2	544 aa	Predicted RBP	13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318	RUSC1-AS1	Q66K80	236 aa		13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318	LRRC8C	Q8TDW0	803 aa		13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318	LRTOMT	Q8WZ04	291 aa		13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318	ZNF582	Q96NG8	517 aa	Predicted RBP	13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318	PCDHAC1	Q9H158	963 aa		13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
SUPT20H-223	ENST00000497318		A0A1W2PPL8	197 aa		13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	ZNF879	B4DU55	563 aa		13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	OPN1SW	P03999	348 aa		13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	CFHR2	P36980	270 aa		13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	CYP51A1	Q16850	503 aa		13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	BEAN1	Q3B7T3	259 aa		13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	DLEU7	Q6UYE1	221 aa		13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	DCDC5	Q6ZRR9	648 aa		13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	PATL1	Q86TB9	770 aa	Known RBP	13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	MOGAT3	Q86VF5	341 aa		13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	RBM45	Q8IUH3	476 aa	Known RBP	13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	GPR32P1	Q8NGA4	272 aa		13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	OR5L1	Q8NGL2	311 aa		13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	MOSPD2	Q8NHP6	518 aa		13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	SLC26A7	Q8TE54	656 aa		13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	CCDC28B	Q9BUN5	200 aa		13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	CDADC1	Q9BWV3	514 aa		13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	POFUT1	Q9H488	388 aa		13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	C16orf95	Q9H693	158 aa		13.78	□□□□□ -0.2
SUPT20H-223	ENST00000497318	CENPVL3	A0A0U1RRI6	287 aa		13.77	□□□□□ -0.21
SUPT20H-223	ENST00000497318		A6NIZ1	184 aa		13.77	□□□□□ -0.21
SUPT20H-223	ENST00000497318		J3QW42	95 aa		13.77	□□□□□ -0.21
SUPT20H-223	ENST00000497318	SGCE	O43556	437 aa		13.77	□□□□□ -0.21
SUPT20H-223	ENST00000497318	DOK2	O60496	412 aa		13.77	□□□□□ -0.21
SUPT20H-223	ENST00000497318	IGHV4-59	P01825	116 aa		13.77	□□□□□ -0.21
SUPT20H-223	ENST00000497318	IER3	P46695	156 aa		13.77	□□□□□ -0.21
SUPT20H-223	ENST00000497318	RGS6	P49758	472 aa		13.77	□□□□□ -0.21
SUPT20H-223	ENST00000497318	RAP1B	P61224	184 aa		13.77	□□□□□ -0.21
SUPT20H-223	ENST00000497318	RPL27	P61353	136 aa	Known RBP	13.77	□□□□□ -0.21
SUPT20H-223	ENST00000497318	RAP1A	P62834	184 aa		13.77	□□□□□ -0.21
SUPT20H-223	ENST00000497318	TOP3A	Q13472	1001 aa	Predicted RBP	13.77	□□□□□ -0.21
SUPT20H-223	ENST00000497318	ENDOG	Q14249	297 aa	Known RBP	13.77	□□□□□ -0.21
SUPT20H-223	ENST00000497318	LAPTM4A	Q15012	233 aa		13.77	□□□□□ -0.21
SUPT20H-223	ENST00000497318	KCNJ8	Q15842	424 aa		13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms