RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 CLDN22Q8N7P3 220 aa14.68□□□□□ -0.06
TMEM53-209ENST00000495630 ATG16L2Q8NAA4 619 aa14.68□□□□□ -0.06
TMEM53-209ENST00000495630 OR10S1Q8NGN2 331 aa14.68□□□□□ -0.06
TMEM53-209ENST00000495630 TSPEARQ8WU66 669 aa14.68□□□□□ -0.06
TMEM53-209ENST00000495630 NEIL1Q96FI4 390 aaPredicted RBP14.68□□□□□ -0.06
TMEM53-209ENST00000495630 CITED1Q99966 193 aa14.68□□□□□ -0.06
TMEM53-209ENST00000495630 NOX4Q9NPH5 578 aa14.68□□□□□ -0.06
TMEM53-209ENST00000495630 POLE4Q9NR33 117 aa14.68□□□□□ -0.06
TMEM53-209ENST00000495630 TRAV40A0A0B4J280 105 aa14.67□□□□□ -0.06
TMEM53-209ENST00000495630 MDFIC2A0A1B0GVS7 189 aa14.67□□□□□ -0.06
TMEM53-209ENST00000495630 M0QZ24 198 aa14.67□□□□□ -0.06
TMEM53-209ENST00000495630 ANGPT2O15123 496 aa14.67□□□□□ -0.06
TMEM53-209ENST00000495630 NDUFA7O95182 113 aa14.67□□□□□ -0.06
TMEM53-209ENST00000495630 SCG5P05408 212 aa14.67□□□□□ -0.06
TMEM53-209ENST00000495630 HTR5AP47898 357 aa14.67□□□□□ -0.06
TMEM53-209ENST00000495630 MMP16P51512 607 aa14.67□□□□□ -0.06
TMEM53-209ENST00000495630 RAG2P55895 527 aa14.67□□□□□ -0.06
TMEM53-209ENST00000495630 GUCY1A3Q02108 690 aa14.67□□□□□ -0.06
TMEM53-209ENST00000495630 SCRN3Q0VDG4 424 aa14.67□□□□□ -0.06
TMEM53-209ENST00000495630 NFYCQ13952 458 aa14.67□□□□□ -0.06
TMEM53-209ENST00000495630 Q6YL49 198 aa14.67□□□□□ -0.06
TMEM53-209ENST00000495630 LRRC75AQ8NAA5 344 aa14.67□□□□□ -0.06
TMEM53-209ENST00000495630 CCT8L2Q96SF2 557 aa14.67□□□□□ -0.06
TMEM53-209ENST00000495630 MMP27Q9H306 513 aa14.67□□□□□ -0.06
TMEM53-209ENST00000495630 NOTCH1P46531 2555 aa14.67□□□□□ -0.06
TMEM53-209ENST00000495630 CLPSL1A2RUU4 121 aa14.66□□□□□ -0.06
TMEM53-209ENST00000495630 J3QW42 95 aa14.66□□□□□ -0.06
TMEM53-209ENST00000495630 TIMM23O14925 209 aa14.66□□□□□ -0.06
TMEM53-209ENST00000495630 SGCEO43556 437 aa14.66□□□□□ -0.06
TMEM53-209ENST00000495630 SRP9P49458 86 aaKnown RBP14.66□□□□□ -0.06
TMEM53-209ENST00000495630 ZNF181Q2M3W8 571 aa14.66□□□□□ -0.06
TMEM53-209ENST00000495630 ANKDD1AQ495B1 522 aa14.66□□□□□ -0.06
TMEM53-209ENST00000495630 FIP1L1Q6UN15 594 aaKnown RBP14.66□□□□□ -0.06
TMEM53-209ENST00000495630 TMEM86BQ8N661 226 aa14.66□□□□□ -0.06
TMEM53-209ENST00000495630 PCYOX1LQ8NBM8 494 aa14.66□□□□□ -0.06
TMEM53-209ENST00000495630 OR13G1Q8NGZ3 307 aa14.66□□□□□ -0.06
TMEM53-209ENST00000495630 LRRC8CQ8TDW0 803 aa14.66□□□□□ -0.06
TMEM53-209ENST00000495630 BPIFA2Q96DR5 249 aa14.66□□□□□ -0.06
TMEM53-209ENST00000495630 FAM71F1Q96KD3 344 aaPredicted RBP14.66□□□□□ -0.06
TMEM53-209ENST00000495630 NUDT16L1Q9BRJ7 211 aaKnown RBP14.66□□□□□ -0.06
TMEM53-209ENST00000495630 TMEM246Q9BRR3 403 aa14.66□□□□□ -0.06
TMEM53-209ENST00000495630 TMBIM4Q9HC24 238 aa14.66□□□□□ -0.06
TMEM53-209ENST00000495630 C1RLQ9NZP8 487 aa14.66□□□□□ -0.06
TMEM53-209ENST00000495630 WNK1Q9H4A3 2382 aa14.65□□□□□ -0.06
TMEM53-209ENST00000495630 DOK2O60496 412 aa14.65□□□□□ -0.06
TMEM53-209ENST00000495630 ZNF205O95201 554 aa14.65□□□□□ -0.06
TMEM53-209ENST00000495630 IFNA14P01570 189 aa14.65□□□□□ -0.06
TMEM53-209ENST00000495630 TNFRSF1BP20333 461 aa14.65□□□□□ -0.06
TMEM53-209ENST00000495630 GPR157Q5UAW9 335 aa14.65□□□□□ -0.06
TMEM53-209ENST00000495630 BRD3OSQ6XYD6 125 aa14.65□□□□□ -0.06
TMEM53-209ENST00000495630 VASH1Q7L8A9 365 aaPredicted RBP14.65□□□□□ -0.06
TMEM53-209ENST00000495630 NLRC3Q7RTR2 1065 aa14.65□□□□□ -0.06
TMEM53-209ENST00000495630 OR8G5Q8NG78 346 aa14.65□□□□□ -0.06
TMEM53-209ENST00000495630 OR8B3Q8NGG8 313 aa14.65□□□□□ -0.06
TMEM53-209ENST00000495630 OR5L1Q8NGL2 311 aa14.65□□□□□ -0.06
TMEM53-209ENST00000495630 ZNF420Q8TAQ5 688 aaPredicted RBP14.65□□□□□ -0.06
TMEM53-209ENST00000495630 MEGF10Q96KG7 1140 aa14.65□□□□□ -0.06
TMEM53-209ENST00000495630 OR8B2Q96RD0 313 aa14.65□□□□□ -0.06
TMEM53-209ENST00000495630 EMC7Q9NPA0 242 aa14.65□□□□□ -0.06
TMEM53-209ENST00000495630 LRRC30A6NM36 301 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 AHCYL1O43865 530 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 SHOX2O60902 331 aaPredicted RBP14.64□□□□□ -0.07
TMEM53-209ENST00000495630 CYB5R3P00387 301 aaPredicted RBP14.64□□□□□ -0.07
TMEM53-209ENST00000495630 IFI30P13284 250 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 OR1E2P47887 323 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 PITPNBP48739 271 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 RPL15P61313 204 aaKnown RBP14.64□□□□□ -0.07
TMEM53-209ENST00000495630 RELBQ01201 579 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 ST3GAL3Q11203 375 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 ZNF404Q494X3 552 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 TTMPQ5BVD1 217 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 BRICD5Q6PL45 260 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 FBXW12Q6X9E4 464 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 RHOUQ7L0Q8 258 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 C1orf87Q8N0U7 546 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 FITM2Q8N6M3 262 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 C10orf82Q8WW14 230 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 STON2Q8WXE9 905 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 ZNF582Q96NG8 517 aaPredicted RBP14.64□□□□□ -0.07
TMEM53-209ENST00000495630 SH3GL1Q99961 368 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 SLC30A2Q9BRI3 323 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 TNFRSF19Q9NS68 423 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 POMT1Q9Y6A1 747 aa14.64□□□□□ -0.07
TMEM53-209ENST00000495630 IFNA8P32881 189 aa14.63□□□□□ -0.07
TMEM53-209ENST00000495630 RGS6P49758 472 aa14.63□□□□□ -0.07
TMEM53-209ENST00000495630 ERFP50548 548 aa14.63□□□□□ -0.07
TMEM53-209ENST00000495630 FGF12P61328 243 aa14.63□□□□□ -0.07
TMEM53-209ENST00000495630 CYLC2Q14093 348 aaPredicted RBP14.63□□□□□ -0.07
TMEM53-209ENST00000495630 PDCD1Q15116 288 aa14.63□□□□□ -0.07
TMEM53-209ENST00000495630 NANOGP8Q6NSW7 305 aa14.63□□□□□ -0.07
TMEM53-209ENST00000495630 C1orf94Q6P1W5 598 aa14.63□□□□□ -0.07
TMEM53-209ENST00000495630 ZNF620Q6ZNG0 422 aa14.63□□□□□ -0.07
TMEM53-209ENST00000495630 OAFQ86UD1 273 aa14.63□□□□□ -0.07
TMEM53-209ENST00000495630 IGFN1Q86VF2 1251 aa14.63□□□□□ -0.07
TMEM53-209ENST00000495630 CALHM3Q86XJ0 350 aa14.63□□□□□ -0.07
TMEM53-209ENST00000495630 OR5AS1Q8N127 324 aa14.63□□□□□ -0.07
TMEM53-209ENST00000495630 OR51A7Q8NH64 312 aa14.63□□□□□ -0.07
TMEM53-209ENST00000495630 RASD2Q96D21 266 aa14.63□□□□□ -0.07
TMEM53-209ENST00000495630 CHIAQ9BZP6 476 aa14.63□□□□□ -0.07
TMEM53-209ENST00000495630 CLN8Q9UBY8 286 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms