RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 RP2O75695 350 aa28.3■■■□□ 2.12
CBX4-203ENST00000494546 MMP15P51511 669 aa28.3■■■□□ 2.12
CBX4-203ENST00000494546 PPP1R8Q12972 351 aaKnown RBP28.3■■■□□ 2.12
CBX4-203ENST00000494546 CCDC92Q53HC0 331 aaPredicted RBP28.3■■■□□ 2.12
CBX4-203ENST00000494546 LINC00471Q8N535 108 aa28.3■■■□□ 2.12
CBX4-203ENST00000494546 SDR9C7Q8NEX9 313 aa28.3■■■□□ 2.12
CBX4-203ENST00000494546 OR4C15Q8NGM1 316 aa28.3■■■□□ 2.12
CBX4-203ENST00000494546 OR1F12Q8NHA8 337 aa28.3■■■□□ 2.12
CBX4-203ENST00000494546 CLPTM1LQ96KA5 538 aa28.3■■■□□ 2.12
CBX4-203ENST00000494546 TRIM15Q9C019 465 aa28.3■■■□□ 2.12
CBX4-203ENST00000494546 TBCCD1Q9NVR7 557 aa28.3■■■□□ 2.12
CBX4-203ENST00000494546 TAS2R1Q9NYW7 299 aa28.3■■■□□ 2.12
CBX4-203ENST00000494546 LPAR3Q9UBY5 353 aa28.3■■■□□ 2.12
CBX4-203ENST00000494546 CCNB2O95067 398 aa28.29■■■□□ 2.12
CBX4-203ENST00000494546 IFNA2P01563 188 aa28.29■■■□□ 2.12
CBX4-203ENST00000494546 GAAP10253 952 aa28.29■■■□□ 2.12
CBX4-203ENST00000494546 FAM98BQ52LJ0 330 aaKnown RBP28.29■■■□□ 2.12
CBX4-203ENST00000494546 SLC35F1Q5T1Q4 408 aa28.29■■■□□ 2.12
CBX4-203ENST00000494546 PGM2L1Q6PCE3 622 aa28.29■■■□□ 2.12
CBX4-203ENST00000494546 OR52L1Q8NGH7 329 aa28.29■■■□□ 2.12
CBX4-203ENST00000494546 FN3KQ9H479 309 aa28.29■■■□□ 2.12
CBX4-203ENST00000494546 POFUT1Q9H488 388 aa28.29■■■□□ 2.12
CBX4-203ENST00000494546 SAP30LQ9HAJ7 183 aa28.29■■■□□ 2.12
CBX4-203ENST00000494546 CDH10Q9Y6N8 788 aa28.29■■■□□ 2.12
CBX4-203ENST00000494546 MALRD1Q5VYJ5 2156 aa28.28■■■□□ 2.12
CBX4-203ENST00000494546 OR6C6A6NF89 314 aa28.28■■■□□ 2.12
CBX4-203ENST00000494546 IDH3BO43837 385 aa28.28■■■□□ 2.12
CBX4-203ENST00000494546 IGHV1-46P01743 117 aa28.28■■■□□ 2.12
CBX4-203ENST00000494546 FAM157CP0CG43 387 aa28.28■■■□□ 2.12
CBX4-203ENST00000494546 GSTM3P21266 225 aa28.28■■■□□ 2.12
CBX4-203ENST00000494546 TEKQ02763 1124 aa28.28■■■□□ 2.12
CBX4-203ENST00000494546 USP51Q70EK9 711 aa28.28■■■□□ 2.12
CBX4-203ENST00000494546 LINC01356Q8N9X3 169 aa28.28■■■□□ 2.12
CBX4-203ENST00000494546 NPEPL1Q8NDH3 523 aa28.28■■■□□ 2.12
CBX4-203ENST00000494546 OR52E2Q8NGJ4 325 aa28.28■■■□□ 2.12
CBX4-203ENST00000494546 LRGUKQ96M69 825 aa28.28■■■□□ 2.12
CBX4-203ENST00000494546 RACGAP1Q9H0H5 632 aa28.28■■■□□ 2.12
CBX4-203ENST00000494546 CYSLTR2Q9NS75 346 aa28.28■■■□□ 2.12
CBX4-203ENST00000494546 U3KQV3 271 aa28.28■■■□□ 2.12
CBX4-203ENST00000494546 IGHV1-69-2A0A0G2JMI3 117 aa28.27■■■□□ 2.12
CBX4-203ENST00000494546 OR6C68A6NDL8 312 aa28.27■■■□□ 2.12
CBX4-203ENST00000494546 ZSCAN5BA6NJL1 495 aa28.27■■■□□ 2.12
CBX4-203ENST00000494546 GASTP01350 101 aa28.27■■■□□ 2.12
CBX4-203ENST00000494546 RPL13AP3Q6NVV1 102 aa28.27■■■□□ 2.12
CBX4-203ENST00000494546 IL17RELQ6ZVW7 336 aa28.27■■■□□ 2.12
CBX4-203ENST00000494546 CLDND2Q8NHS1 167 aa28.27■■■□□ 2.12
CBX4-203ENST00000494546 ASB9Q96DX5 294 aa28.27■■■□□ 2.12
CBX4-203ENST00000494546 THTPAQ9BU02 230 aa28.27■■■□□ 2.12
CBX4-203ENST00000494546 C1orf21Q9H246 121 aa28.27■■■□□ 2.12
CBX4-203ENST00000494546 REEP1Q9H902 201 aa28.27■■■□□ 2.12
CBX4-203ENST00000494546 SAMHD1Q9Y3Z3 626 aaKnown RBP28.27■■■□□ 2.12
CBX4-203ENST00000494546 LHFPL6Q9Y693 200 aa28.27■■■□□ 2.12
CBX4-203ENST00000494546 WNT9BO14905 357 aa28.26■■■□□ 2.11
CBX4-203ENST00000494546 TIMM8AO60220 97 aaPredicted RBP28.26■■■□□ 2.11
CBX4-203ENST00000494546 LIPAP38571 399 aa28.26■■■□□ 2.11
CBX4-203ENST00000494546 CRYBB2P43320 205 aa28.26■■■□□ 2.11
CBX4-203ENST00000494546 KHDRBS1Q07666 443 aaKnown RBP eCLIP28.26■■■□□ 2.11
CBX4-203ENST00000494546 PSG7Q13046 419 aa28.26■■■□□ 2.11
CBX4-203ENST00000494546 FAM209AQ5JX71 171 aa28.26■■■□□ 2.11
CBX4-203ENST00000494546 FAM120AOSQ5T036 256 aa28.26■■■□□ 2.11
CBX4-203ENST00000494546 OR2T5Q6IEZ7 315 aa28.26■■■□□ 2.11
CBX4-203ENST00000494546 ZNF770Q6IQ21 691 aaPredicted RBP28.26■■■□□ 2.11
CBX4-203ENST00000494546 CORO6Q6QEF8 472 aa28.26■■■□□ 2.11
CBX4-203ENST00000494546 AQP11Q8NBQ7 271 aa28.26■■■□□ 2.11
CBX4-203ENST00000494546 GJC3Q8NFK1 279 aa28.26■■■□□ 2.11
CBX4-203ENST00000494546 OR2T29Q8NH02 315 aa28.26■■■□□ 2.11
CBX4-203ENST00000494546 MDFIQ99750 246 aa28.26■■■□□ 2.11
CBX4-203ENST00000494546 MSL2Q9HCI7 577 aa28.26■■■□□ 2.11
CBX4-203ENST00000494546 VNN3Q9NY84 501 aa28.26■■■□□ 2.11
CBX4-203ENST00000494546 FAM53CQ9NYF3 392 aa28.26■■■□□ 2.11
CBX4-203ENST00000494546 CGGBP1Q9UFW8 167 aaPredicted RBP28.26■■■□□ 2.11
CBX4-203ENST00000494546 STARD10Q9Y365 291 aa28.26■■■□□ 2.11
CBX4-203ENST00000494546 DBHP09172 617 aa28.25■■■□□ 2.11
CBX4-203ENST00000494546 CDH15P55291 814 aa28.25■■■□□ 2.11
CBX4-203ENST00000494546 SLC26A10Q8NG04 563 aa28.25■■■□□ 2.11
CBX4-203ENST00000494546 POP5Q969H6 163 aaKnown RBP28.25■■■□□ 2.11
CBX4-203ENST00000494546 PLA2G12AQ9BZM1 189 aa28.25■■■□□ 2.11
CBX4-203ENST00000494546 CACNG2Q9Y698 323 aa28.25■■■□□ 2.11
CBX4-203ENST00000494546 HLA-DQA2P01906 255 aa28.24■■■□□ 2.11
CBX4-203ENST00000494546 TFP02787 698 aa28.24■■■□□ 2.11
CBX4-203ENST00000494546 TUBG1P23258 451 aa28.24■■■□□ 2.11
CBX4-203ENST00000494546 AVPI1Q5T686 147 aa28.24■■■□□ 2.11
CBX4-203ENST00000494546 TRPM8Q7Z2W7 1104 aa28.24■■■□□ 2.11
CBX4-203ENST00000494546 ZBTB46Q86UZ6 589 aa28.24■■■□□ 2.11
CBX4-203ENST00000494546 BCAS4Q8TDM0 211 aa28.24■■■□□ 2.11
CBX4-203ENST00000494546 TUBG2Q9NRH3 451 aa28.24■■■□□ 2.11
CBX4-203ENST00000494546 TREM2Q9NZC2 230 aa28.24■■■□□ 2.11
CBX4-203ENST00000494546 ATPIF1Q9UII2 106 aa28.24■■■□□ 2.11
CBX4-203ENST00000494546 BHLHE40O14503 412 aa28.23■■■□□ 2.11
CBX4-203ENST00000494546 HIST1H3AP68431 136 aa28.23■■■□□ 2.11
CBX4-203ENST00000494546 MVKQ03426 396 aa28.23■■■□□ 2.11
CBX4-203ENST00000494546 COX10Q12887 443 aa28.23■■■□□ 2.11
CBX4-203ENST00000494546 HFEQ30201 348 aa28.23■■■□□ 2.11
CBX4-203ENST00000494546 ZMAT1Q5H9K5 638 aa28.23■■■□□ 2.11
CBX4-203ENST00000494546 HIST2H3PS2Q5TEC6 136 aa28.23■■■□□ 2.11
CBX4-203ENST00000494546 RASSF6Q6ZTQ3 369 aa28.23■■■□□ 2.11
CBX4-203ENST00000494546 HIST2H3AQ71DI3 136 aa28.23■■■□□ 2.11
CBX4-203ENST00000494546 LINC00346Q8IVM7 164 aa28.23■■■□□ 2.11
CBX4-203ENST00000494546 OR8D4Q8NGM9 314 aa28.23■■■□□ 2.11
CBX4-203ENST00000494546 CMBLQ96DG6 245 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms