RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 ACOT13Q9NPJ3 140 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 FKBP7Q9Y680 259 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 FN1P02751 2386 aaKnown RBP11.4□□□□□ -0.58
ERCC3-209ENST00000494464 A0A096LNT2 108 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 M0R129 80 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 FARS2O95363 451 aaKnown RBP11.4□□□□□ -0.59
ERCC3-209ENST00000494464 QDPRP09417 244 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 OR8G3PP0DMU2 310 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 NR2C1P13056 603 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 IFI30P13284 250 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 ZNF35P13682 527 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 SLC25A16P16260 332 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 THBS4P35443 961 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 GPR4P46093 362 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 SLC9A3P48764 834 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 GP2P55259 537 aaKnown RBP11.4□□□□□ -0.59
ERCC3-209ENST00000494464 RAB1AP62820 205 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 RUNX1T1Q06455 604 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 SNTB2Q13425 540 aaKnown RBP11.4□□□□□ -0.59
ERCC3-209ENST00000494464 IRF3Q14653 427 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 ALG10Q5BKT4 473 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 VHLLQ6RSH7 139 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 SKA3Q8IX90 412 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 IQCF1Q8N6M8 205 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 ZNF525Q8N782 197 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 RAB2BQ8WUD1 216 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 MCHR2Q969V1 340 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 MS4A3Q96HJ5 214 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 SORCS2Q96PQ0 1159 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 CDCA4Q9BXL8 241 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 TBC1D23Q9NUY8 699 aa11.4□□□□□ -0.59
ERCC3-209ENST00000494464 NAV3Q8IVL0 2385 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 ANK3Q12955 4377 aaKnown RBP11.39□□□□□ -0.59
ERCC3-209ENST00000494464 UNC119BA6NIH7 251 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 VSTM5A8MXK1 200 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 AHCYL1O43865 530 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 ENTPD6O75354 484 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 TRMUO75648 421 aaKnown RBP11.39□□□□□ -0.59
ERCC3-209ENST00000494464 FADS2O95864 444 aaKnown RBP11.39□□□□□ -0.59
ERCC3-209ENST00000494464 F12P00748 615 aaPredicted RBP11.39□□□□□ -0.59
ERCC3-209ENST00000494464 SAGP10523 405 aaPredicted RBP11.39□□□□□ -0.59
ERCC3-209ENST00000494464 NPR2P20594 1047 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 NR4A1P22736 598 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 ZNF84P51523 738 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 GPR107Q5VW38 600 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 RNLSQ5VYX0 342 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 FAM205BPQ63HN1 556 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 ACSM5Q6NUN0 579 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 ERI1Q8IV48 349 aaKnown RBP11.39□□□□□ -0.59
ERCC3-209ENST00000494464 ZNF584Q8IVC4 421 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 CDK20Q8IZL9 346 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 TCEANCQ8N8B7 351 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 MAPK1IP1LQ8NDC0 245 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 OR2T33Q8NG76 320 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 TMEM163Q8TC26 289 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 FANK1Q8TC84 345 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 C10orf105Q8TEF2 133 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 FAM168AQ92567 244 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 HTRA1Q92743 480 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 C12orf43Q96C57 262 aaKnown RBP11.39□□□□□ -0.59
ERCC3-209ENST00000494464 KCNK17Q96T54 332 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 ALG12Q9BV10 488 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 TXNIPQ9H3M7 391 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 C1orf198Q9H425 327 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 MYOZ1Q9NP98 299 aaPredicted RBP11.39□□□□□ -0.59
ERCC3-209ENST00000494464 TVP23BQ9NYZ1 205 aa11.39□□□□□ -0.59
ERCC3-209ENST00000494464 RPL36Q9Y3U8 105 aaKnown RBP11.39□□□□□ -0.59
ERCC3-209ENST00000494464 TLN2Q9Y4G6 2542 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 IRGMA1A4Y4 181 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 VGLL3A8MV65 326 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 H3BMQ9 156 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 CDC42EP2O14613 210 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 PRKYO43930 277 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 INMTO95050 263 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 HMGN1P05114 100 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 SERPINA5P05154 406 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 MAKP20794 623 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 GRK5P34947 590 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 MAP2K4P45985 399 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 RPL27P61353 136 aaKnown RBP11.38□□□□□ -0.59
ERCC3-209ENST00000494464 RPS23P62266 143 aaKnown RBP11.38□□□□□ -0.59
ERCC3-209ENST00000494464 ZNF91Q05481 1191 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 LSAMPQ13449 338 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 FHL1Q13642 323 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 SLC36A2Q495M3 483 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 ANKRD13BQ86YJ7 626 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 STX19Q8N4C7 294 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 LRRC75AQ8NAA5 344 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 SYT14Q8NB59 555 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 OR52L1Q8NGH7 329 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 FGFBP3Q8TAT2 258 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 FNDC8Q8TC99 324 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 COG8Q96MW5 612 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 IL4I1Q96RQ9 567 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 TSSK6Q9BXA6 273 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 ENPP5Q9UJA9 477 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 SPEF1Q9Y4P9 236 aa11.38□□□□□ -0.59
ERCC3-209ENST00000494464 HIVEP2P31629 2446 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 TMEM129A0AVI4 362 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 SNTNA6NMZ2 147 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms