RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 WNT5AP41221 380 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 EVX1P49640 407 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 PPOXP50336 477 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 PCBD1P61457 104 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 ERVS71-1P61550 626 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 HSF2Q03933 536 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 PLP2Q04941 152 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 ATP6AP1Q15904 470 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 MEP1BQ16820 701 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 TBC1D28Q2M2D7 210 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 SLC36A3Q495N2 470 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 C1orf146Q5VVC0 180 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 ZNF774Q6NX45 483 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 FAHD1Q6P587 224 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 SHQ1Q6PI26 577 aaKnown RBP7.53□□□□□ -1.2
ITGB1-217ENST00000494395 DNM1P34Q6PK57 102 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 CCDC121Q6ZUS5 278 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 SLC37A3Q8NCC5 494 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 OR2T33Q8NG76 320 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 C11orf40Q8WZ69 217 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 NRBF2Q96F24 287 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 COX4I2Q96KJ9 171 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 Q96M66 194 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 Q96MF0 132 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 SORCS2Q96PQ0 1159 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 RBM4Q9BWF3 364 aaKnown RBP7.53□□□□□ -1.2
ITGB1-217ENST00000494395 MRPL37Q9BZE1 423 aaKnown RBP7.53□□□□□ -1.2
ITGB1-217ENST00000494395 KCNN2Q9H2S1 579 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 RPRD1BQ9NQG5 326 aaKnown RBP7.53□□□□□ -1.2
ITGB1-217ENST00000494395 CMC2Q9NRP2 79 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 TPSG1Q9NRR2 321 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 MRPL22Q9NWU5 206 aaKnown RBP7.53□□□□□ -1.2
ITGB1-217ENST00000494395 MYEF2Q9P2K5 600 aaKnown RBP7.53□□□□□ -1.2
ITGB1-217ENST00000494395 ATPIF1Q9UII2 106 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 BAIAP2Q9UQB8 552 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 CMAHPQ9Y471 501 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 TIMM10BQ9Y5J6 103 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 LHFPL6Q9Y693 200 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 ACANP16112 2415 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 FLNAP21333 2647 aaKnown RBP7.53□□□□□ -1.2
ITGB1-217ENST00000494395 MAP1AP78559 2803 aaPredicted RBP7.53□□□□□ -1.2
ITGB1-217ENST00000494395 IGLV3-9A0A075B6K5 115 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 A0A096LNT2 108 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 OR6C6A6NF89 314 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 EBAG9O00559 213 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 GNGT2O14610 69 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 SGCEO43556 437 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 E2F6O75461 281 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 PSKH1P11801 424 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 ANXA8P13928 327 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 CD99P14209 185 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 FOSL1P15407 271 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 GRK5P34947 590 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 APLNRP35414 380 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 GUCA1AP43080 201 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-217ENST00000494395 DAPP51397 102 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 UCP2P55851 309 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 ACTR3P61158 418 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 RPS23P62266 143 aaKnown RBP7.52□□□□□ -1.21
ITGB1-217ENST00000494395 CDK5Q00535 292 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 SCRN3Q0VDG4 424 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 CRMP1Q14194 572 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 CCDC92Q53HC0 331 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-217ENST00000494395 TMEM255AQ5JRV8 349 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 LINC01590Q5TEZ4 76 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 ACSM5Q6NUN0 579 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 LRP11Q86VZ4 500 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 ZNF101Q8IZC7 436 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 CIARTQ8N365 385 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-217ENST00000494395 SVOPLQ8N434 492 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 IQCF1Q8N6M8 205 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 CYB561A3Q8NBI2 242 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 OR1J2Q8NGS2 313 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 OR5K1Q8NHB7 308 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 HCAR1Q9BXC0 346 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 RERGLQ9H628 205 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 CDH20Q9HBT6 801 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 BARX1Q9HBU1 254 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-217ENST00000494395 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-217ENST00000494395 ASH2LQ9UBL3 628 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 KLHL21Q9UJP4 597 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 SPEF1Q9Y4P9 236 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 AP4S1Q9Y587 144 aa7.52□□□□□ -1.21
ITGB1-217ENST00000494395 C5orf49A4QMS7 147 aa7.51□□□□□ -1.21
ITGB1-217ENST00000494395 TRIM64A6NGJ6 449 aa7.51□□□□□ -1.21
ITGB1-217ENST00000494395 TRIM64BA6NI03 449 aa7.51□□□□□ -1.21
ITGB1-217ENST00000494395 FAM171A2A8MVW0 826 aa7.51□□□□□ -1.21
ITGB1-217ENST00000494395 H3BNX3 289 aa7.51□□□□□ -1.21
ITGB1-217ENST00000494395 RER1O15258 196 aa7.51□□□□□ -1.21
ITGB1-217ENST00000494395 DOK2O60496 412 aa7.51□□□□□ -1.21
ITGB1-217ENST00000494395 CLUP10909 449 aa7.51□□□□□ -1.21
ITGB1-217ENST00000494395 OSMP13725 252 aa7.51□□□□□ -1.21
ITGB1-217ENST00000494395 SPI1P17947 270 aa7.51□□□□□ -1.21
ITGB1-217ENST00000494395 PYCR1P32322 319 aa7.51□□□□□ -1.21
ITGB1-217ENST00000494395 GGT2P36268 569 aa7.51□□□□□ -1.21
ITGB1-217ENST00000494395 EFNA4P52798 201 aa7.51□□□□□ -1.21
ITGB1-217ENST00000494395 SLC25A1P53007 311 aa7.51□□□□□ -1.21
ITGB1-217ENST00000494395 SNRPD2P62316 118 aaKnown RBP7.51□□□□□ -1.21
ITGB1-217ENST00000494395 GALK2Q01415 458 aa7.51□□□□□ -1.21
ITGB1-217ENST00000494395 TEKQ02763 1124 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms