RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 TRIM64A6NGJ6 449 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 TRIM64BA6NI03 449 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 RIIAD1A6NNX1 92 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 SURF4O15260 269 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 NGFP01138 241 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 PTHP01270 115 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 HLA-DQA2P01906 255 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 FCGR1AP12314 374 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 GLRXP35754 106 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 GGT2P36268 569 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 POLR2IP36954 125 aaKnown RBP10.01□□□□□ -0.81
UBA3-211ENST00000493957 GDI2P50395 445 aaKnown RBP10.01□□□□□ -0.81
UBA3-211ENST00000493957 ARHGDIAP52565 204 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 SLC25A1P53007 311 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 CRISP1P54107 249 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 HIST1H3AP68431 136 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 GLO1Q04760 184 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 SCRN3Q0VDG4 424 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 MAD2L1BPQ15013 274 aaPredicted RBP10.01□□□□□ -0.81
UBA3-211ENST00000493957 EFNB3Q15768 340 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 ALKBH6Q3KRA9 238 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 HIST2H3PS2Q5TEC6 136 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 LINC01590Q5TEZ4 76 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 KDM4DQ6B0I6 523 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 PLBD1Q6P4A8 553 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 TMEM154Q6P9G4 183 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 HIST2H3AQ71DI3 136 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 SYT9Q86SS6 491 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 TGIF2LYQ8IUE0 185 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 CIARTQ8N365 385 aaPredicted RBP10.01□□□□□ -0.81
UBA3-211ENST00000493957 BBS1Q8NFJ9 593 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 OR10S1Q8NGN2 331 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 OR1J2Q8NGS2 313 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 OR2T4Q8NH00 348 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 GTF3AQ92664 365 aaKnown RBP10.01□□□□□ -0.81
UBA3-211ENST00000493957 PTP4A1Q93096 173 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 MRPL24Q96A35 216 aaKnown RBP10.01□□□□□ -0.81
UBA3-211ENST00000493957 OTULINQ96BN8 352 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 CENPNQ96H22 339 aaPredicted RBP10.01□□□□□ -0.81
UBA3-211ENST00000493957 MAP6Q96JE9 813 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 Q96MF0 132 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 SORCS2Q96PQ0 1159 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 RAB3IPQ96QF0 476 aaPredicted RBP10.01□□□□□ -0.81
UBA3-211ENST00000493957 DOK1Q99704 481 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 CIB1Q99828 191 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 C1orf198Q9H425 327 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 PLK3Q9H4B4 646 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 HINT3Q9NQE9 182 aaKnown RBP10.01□□□□□ -0.81
UBA3-211ENST00000493957 KRT84Q9NSB2 600 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 PLEK2Q9NYT0 353 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 CMAHPQ9Y471 501 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 COMMD3-BMI1R4GMX3 469 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 TLN2Q9Y4G6 2542 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 ABCA2Q9BZC7 2435 aa10.01□□□□□ -0.81
UBA3-211ENST00000493957 B9A039 149 aa10□□□□□ -0.81
UBA3-211ENST00000493957 H7C417 338 aa10□□□□□ -0.81
UBA3-211ENST00000493957 TMCC2O75069 709 aa10□□□□□ -0.81
UBA3-211ENST00000493957 IFNGP01579 166 aa10□□□□□ -0.81
UBA3-211ENST00000493957 IGHA1P01876 353 aa10□□□□□ -0.81
UBA3-211ENST00000493957 LCKP06239 509 aa10□□□□□ -0.81
UBA3-211ENST00000493957 ZNF3P17036 446 aa10□□□□□ -0.81
UBA3-211ENST00000493957 ANOS1P23352 680 aa10□□□□□ -0.81
UBA3-211ENST00000493957 MPV17P39210 176 aa10□□□□□ -0.81
UBA3-211ENST00000493957 ALDH3B1P43353 468 aa10□□□□□ -0.81
UBA3-211ENST00000493957 UCP2P55851 309 aa10□□□□□ -0.81
UBA3-211ENST00000493957 SNRPD2P62316 118 aaKnown RBP10□□□□□ -0.81
UBA3-211ENST00000493957 PPP2R2BQ00005 443 aa10□□□□□ -0.81
UBA3-211ENST00000493957 PTGES3Q15185 160 aaKnown RBP10□□□□□ -0.81
UBA3-211ENST00000493957 RAB35Q15286 201 aa10□□□□□ -0.81
UBA3-211ENST00000493957 RSPO1Q2MKA7 263 aaPredicted RBP10□□□□□ -0.81
UBA3-211ENST00000493957 SHEQ5VZ18 495 aa10□□□□□ -0.81
UBA3-211ENST00000493957 ZDHHC13Q8IUH4 622 aa10□□□□□ -0.81
UBA3-211ENST00000493957 CPOQ8IVL8 374 aa10□□□□□ -0.81
UBA3-211ENST00000493957 ALDH16A1Q8IZ83 802 aa10□□□□□ -0.81
UBA3-211ENST00000493957 PARP8Q8N3A8 854 aa10□□□□□ -0.81
UBA3-211ENST00000493957 OR10H5Q8NGA6 315 aa10□□□□□ -0.81
UBA3-211ENST00000493957 OR1J1Q8NGS3 322 aa10□□□□□ -0.81
UBA3-211ENST00000493957 OR6K6Q8NGW6 343 aa10□□□□□ -0.81
UBA3-211ENST00000493957 OR1F12Q8NHA8 337 aa10□□□□□ -0.81
UBA3-211ENST00000493957 TRMT61AQ96FX7 289 aaKnown RBP10□□□□□ -0.81
UBA3-211ENST00000493957 OR51V1Q9H2C8 321 aa10□□□□□ -0.81
UBA3-211ENST00000493957 TPK1Q9H3S4 243 aa10□□□□□ -0.81
UBA3-211ENST00000493957 S100A14Q9HCY8 104 aa10□□□□□ -0.81
UBA3-211ENST00000493957 PNRC2Q9NPJ4 139 aaKnown RBP10□□□□□ -0.81
UBA3-211ENST00000493957 CYB5R1Q9UHQ9 305 aa10□□□□□ -0.81
UBA3-211ENST00000493957 SPEF1Q9Y4P9 236 aa10□□□□□ -0.81
UBA3-211ENST00000493957 ABCA1O95477 2261 aa9.99□□□□□ -0.81
UBA3-211ENST00000493957 DYSFO75923 2080 aa9.99□□□□□ -0.81
UBA3-211ENST00000493957 SSX4O60224 188 aa9.99□□□□□ -0.81
UBA3-211ENST00000493957 SPARCP09486 303 aa9.99□□□□□ -0.81
UBA3-211ENST00000493957 COX5BP10606 129 aa9.99□□□□□ -0.81
UBA3-211ENST00000493957 IGFBP5P24593 272 aa9.99□□□□□ -0.81
UBA3-211ENST00000493957 PCSK6P29122 969 aa9.99□□□□□ -0.81
UBA3-211ENST00000493957 ELFN2Q5R3F8 820 aa9.99□□□□□ -0.81
UBA3-211ENST00000493957 RGS7BPQ6MZT1 257 aaPredicted RBP9.99□□□□□ -0.81
UBA3-211ENST00000493957 ZFP1Q6P2D0 407 aa9.99□□□□□ -0.81
UBA3-211ENST00000493957 BCDIN3DQ7Z5W3 292 aaKnown RBP9.99□□□□□ -0.81
UBA3-211ENST00000493957 ZNF525Q8N782 197 aa9.99□□□□□ -0.81
UBA3-211ENST00000493957 ABHD4Q8TB40 342 aa9.99□□□□□ -0.81
UBA3-211ENST00000493957 SLC25A40Q8TBP6 338 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms