RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 WNT2P09544 360 aa14.58□□□□□ -0.08
COL9A1-210ENST00000493682 MMP16P51512 607 aa14.58□□□□□ -0.08
COL9A1-210ENST00000493682 IL13RA1P78552 427 aa14.58□□□□□ -0.08
COL9A1-210ENST00000493682 TRAM2Q15035 370 aa14.58□□□□□ -0.08
COL9A1-210ENST00000493682 SLC9A3R2Q15599 337 aa14.58□□□□□ -0.08
COL9A1-210ENST00000493682 OFCC1Q8IZS5 231 aa14.58□□□□□ -0.08
COL9A1-210ENST00000493682 MUC20Q8N307 709 aaPredicted RBP14.58□□□□□ -0.08
COL9A1-210ENST00000493682 OR2T12Q8NG77 320 aa14.58□□□□□ -0.08
COL9A1-210ENST00000493682 SLC7A6Q92536 515 aa14.58□□□□□ -0.08
COL9A1-210ENST00000493682 PTP4A1Q93096 173 aa14.58□□□□□ -0.08
COL9A1-210ENST00000493682 COG8Q96MW5 612 aa14.58□□□□□ -0.08
COL9A1-210ENST00000493682 FNDC11Q9BVV2 318 aa14.58□□□□□ -0.08
COL9A1-210ENST00000493682 TMEM120AQ9BXJ8 343 aa14.58□□□□□ -0.08
COL9A1-210ENST00000493682 GCM1Q9NP62 436 aa14.58□□□□□ -0.08
COL9A1-210ENST00000493682 GRHPRQ9UBQ7 328 aa14.58□□□□□ -0.08
COL9A1-210ENST00000493682 LRCH1Q9Y2L9 728 aa14.58□□□□□ -0.08
COL9A1-210ENST00000493682 IGHV3OR16-10A0A075B7F0 116 aa14.57□□□□□ -0.08
COL9A1-210ENST00000493682 BBIP1A8MTZ0 92 aa14.57□□□□□ -0.08
COL9A1-210ENST00000493682 HMGB1P1B2RPK0 211 aaPredicted RBP14.57□□□□□ -0.08
COL9A1-210ENST00000493682 J3KTA2 159 aa14.57□□□□□ -0.08
COL9A1-210ENST00000493682 CDC42EP2O14613 210 aa14.57□□□□□ -0.08
COL9A1-210ENST00000493682 FFAR1O14842 300 aa14.57□□□□□ -0.08
COL9A1-210ENST00000493682 IGHV4-38-2P0DP08 117 aa14.57□□□□□ -0.08
COL9A1-210ENST00000493682 ZNF26P17031 533 aaPredicted RBP14.57□□□□□ -0.08
COL9A1-210ENST00000493682 RPL4P36578 427 aaKnown RBP14.57□□□□□ -0.08
COL9A1-210ENST00000493682 SLC9A3P48764 834 aa14.57□□□□□ -0.08
COL9A1-210ENST00000493682 GUCY1A3Q02108 690 aa14.57□□□□□ -0.08
COL9A1-210ENST00000493682 PAX2Q02962 417 aa14.57□□□□□ -0.08
COL9A1-210ENST00000493682 KLF10Q13118 480 aa14.57□□□□□ -0.08
COL9A1-210ENST00000493682 OTPQ5XKR4 325 aa14.57□□□□□ -0.08
COL9A1-210ENST00000493682 C1orf94Q6P1W5 598 aa14.57□□□□□ -0.08
COL9A1-210ENST00000493682 VTCN1Q7Z7D3 282 aa14.57□□□□□ -0.08
COL9A1-210ENST00000493682 ATG16L2Q8NAA4 619 aa14.57□□□□□ -0.08
COL9A1-210ENST00000493682 FAM156AQ8NDB6 213 aa14.57□□□□□ -0.08
COL9A1-210ENST00000493682 OR52E2Q8NGJ4 325 aa14.57□□□□□ -0.08
COL9A1-210ENST00000493682 TAF15Q92804 592 aaKnown RBP eCLIP14.57□□□□□ -0.08
COL9A1-210ENST00000493682 Q96M85 177 aa14.57□□□□□ -0.08
COL9A1-210ENST00000493682 SSBP3Q9BWW4 388 aaPredicted RBP14.57□□□□□ -0.08
COL9A1-210ENST00000493682 IL20RAQ9UHF4 553 aa14.57□□□□□ -0.08
COL9A1-210ENST00000493682 SOX21Q9Y651 276 aaPredicted RBP14.57□□□□□ -0.08
COL9A1-210ENST00000493682 TRRAPQ9Y4A5 3859 aa14.57□□□□□ -0.08
COL9A1-210ENST00000493682 A0A087WUU8 490 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 TEX13CA0A0J9YWL9 993 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 PRSS37A4D1T9 235 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 OR6C6A6NF89 314 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 POM121CA8CG34 1229 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 XKRYO14609 159 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 AHCYL1O43865 530 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 IFNW1P05000 195 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 CD14P08571 375 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 PPIAL4GP0DN37 164 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 RAC2P15153 192 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 CTLA4P16410 223 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 GPR4P46093 362 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 MTNR1AP48039 350 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 AQP6Q13520 282 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 MESTQ5EB52 335 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 TBPL2Q6SJ96 375 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 TREML4Q6UXN2 200 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 ZNF730Q6ZMV8 503 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 C9orf139Q6ZV77 190 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 FAM122BQ7Z309 247 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 JAZF1Q86VZ6 243 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 RNF113BQ8IZP6 322 aaKnown RBP14.56□□□□□ -0.08
COL9A1-210ENST00000493682 OR5AS1Q8N127 324 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 PARP8Q8N3A8 854 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 ZNF454Q8N9F8 522 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 ZNF420Q8TAQ5 688 aaPredicted RBP14.56□□□□□ -0.08
COL9A1-210ENST00000493682 ACOT11Q8WXI4 607 aaPredicted RBP14.56□□□□□ -0.08
COL9A1-210ENST00000493682 LZICQ8WZA0 190 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 GID8Q9NWU2 228 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 ASH2LQ9UBL3 628 aa14.56□□□□□ -0.08
COL9A1-210ENST00000493682 LOC100653049A0A140TA62 436 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 ELOVL7A1L3X0 281 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 IFNL4K9M1U5 179 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 KRT34O76011 436 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 ZNF205O95201 554 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 CPT2P23786 658 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 HLXQ14774 488 aaPredicted RBP14.55□□□□□ -0.08
COL9A1-210ENST00000493682 ZBED5Q49AG3 693 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 CCDC92Q53HC0 331 aaPredicted RBP14.55□□□□□ -0.08
COL9A1-210ENST00000493682 SLC27A4Q6P1M0 643 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 LEG1Q6P5S2 330 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 BTNL3Q6UXE8 466 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 LRRN1Q6UXK5 716 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 TMPRSS11FQ6ZWK6 438 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 MBOAT2Q6ZWT7 520 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 PCYOX1LQ8NBM8 494 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 OR10AD1Q8NGE0 317 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 OR1F12Q8NHA8 337 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 UPRTQ96BW1 309 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 MEGF10Q96KG7 1140 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 ZNF570Q96NI8 536 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 TMEM165Q9HC07 324 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 SAR1AQ9NR31 198 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 MRGBPQ9NV56 204 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 PTTG3PQ9NZH4 202 aa14.55□□□□□ -0.08
COL9A1-210ENST00000493682 IGHV2-70DA0A0C4DH43 119 aa14.54□□□□□ -0.08
COL9A1-210ENST00000493682 J3QW42 95 aa14.54□□□□□ -0.08
COL9A1-210ENST00000493682 SLC16A7O60669 478 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms