RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 FSHBP01225 129 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 SBK2P0C263 348 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 FPR2P25090 351 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 GSK3BP49841 420 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 LSM6P62312 80 aaKnown RBP14.03□□□□□ -0.16
PTPRU-208ENST00000493601 BTG1P62324 171 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 GUCY1A3Q02108 690 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 DGCR6Q14129 220 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 TMEM155Q4W5P6 130 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 ADCK1Q86TW2 530 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 ZNF283Q8N7M2 679 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 SLC7A13Q8TCU3 470 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 RASD2Q96D21 266 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 CMBLQ96DG6 245 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 FAM46AQ96IP4 442 aaKnown RBP14.03□□□□□ -0.16
PTPRU-208ENST00000493601 GPX7Q96SL4 187 aaPredicted RBP14.03□□□□□ -0.16
PTPRU-208ENST00000493601 PLA2G12AQ9BZM1 189 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 SYT4Q9H2B2 425 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 EFCAB1Q9HAE3 211 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 KRCC1Q9NPI7 259 aaPredicted RBP14.03□□□□□ -0.16
PTPRU-208ENST00000493601 ASH2LQ9UBL3 628 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 IL19Q9UHD0 177 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 ATPIF1Q9UII2 106 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 RPS6KA6Q9UK32 745 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 ARHGAP32A7KAX9 2087 aa14.02□□□□□ -0.16
PTPRU-208ENST00000493601 OR6C6A6NF89 314 aa14.02□□□□□ -0.17
PTPRU-208ENST00000493601 SLC16A7O60669 478 aa14.02□□□□□ -0.17
PTPRU-208ENST00000493601 CCDC22O60826 627 aa14.02□□□□□ -0.17
PTPRU-208ENST00000493601 KHDRBS3O75525 346 aaKnown RBP14.02□□□□□ -0.17
PTPRU-208ENST00000493601 H1F0P07305 194 aaKnown RBP14.02□□□□□ -0.17
PTPRU-208ENST00000493601 RGS6P49758 472 aa14.02□□□□□ -0.17
PTPRU-208ENST00000493601 NUDT2P50583 147 aa14.02□□□□□ -0.17
PTPRU-208ENST00000493601 ARMCX4Q5H9R4 360 aa14.02□□□□□ -0.17
PTPRU-208ENST00000493601 FGD3Q5JSP0 725 aa14.02□□□□□ -0.17
PTPRU-208ENST00000493601 C8orf82Q6P1X6 216 aaPredicted RBP14.02□□□□□ -0.17
PTPRU-208ENST00000493601 HACD2Q6Y1H2 254 aa14.02□□□□□ -0.17
PTPRU-208ENST00000493601 Q6ZR03 302 aa14.02□□□□□ -0.17
PTPRU-208ENST00000493601 HAVCR1Q96D42 359 aa14.02□□□□□ -0.17
PTPRU-208ENST00000493601 DCLRE1CQ96SD1 692 aaKnown RBP14.02□□□□□ -0.17
PTPRU-208ENST00000493601 RERGLQ9H628 205 aa14.02□□□□□ -0.17
PTPRU-208ENST00000493601 NTN4Q9HB63 628 aa14.02□□□□□ -0.17
PTPRU-208ENST00000493601 NRIP3Q9NQ35 241 aa14.02□□□□□ -0.17
PTPRU-208ENST00000493601 DCAF16Q9NXF7 216 aa14.02□□□□□ -0.17
PTPRU-208ENST00000493601 VSX1Q9NZR4 365 aaPredicted RBP14.02□□□□□ -0.17
PTPRU-208ENST00000493601 PPP1R3CQ9UQK1 317 aa14.02□□□□□ -0.17
PTPRU-208ENST00000493601 SIGLEC7Q9Y286 467 aa14.02□□□□□ -0.17
PTPRU-208ENST00000493601 POLR1DQ9Y2S0 133 aa14.02□□□□□ -0.17
PTPRU-208ENST00000493601 STARD10Q9Y365 291 aa14.02□□□□□ -0.17
PTPRU-208ENST00000493601 FAM32AQ9Y421 112 aaKnown RBP14.02□□□□□ -0.17
PTPRU-208ENST00000493601 IFNL4K9M1U5 179 aa14.01□□□□□ -0.17
PTPRU-208ENST00000493601 RAC2P15153 192 aa14.01□□□□□ -0.17
PTPRU-208ENST00000493601 ZFP36P26651 326 aaKnown RBP14.01□□□□□ -0.17
PTPRU-208ENST00000493601 C1orf94Q6P1W5 598 aa14.01□□□□□ -0.17
PTPRU-208ENST00000493601 PGM2L1Q6PCE3 622 aa14.01□□□□□ -0.17
PTPRU-208ENST00000493601 LRRC28Q86X40 367 aaPredicted RBP14.01□□□□□ -0.17
PTPRU-208ENST00000493601 OR5L1Q8NGL2 311 aa14.01□□□□□ -0.17
PTPRU-208ENST00000493601 OR1F12Q8NHA8 337 aa14.01□□□□□ -0.17
PTPRU-208ENST00000493601 ITLN1Q8WWA0 313 aa14.01□□□□□ -0.17
PTPRU-208ENST00000493601 PTP4A1Q93096 173 aa14.01□□□□□ -0.17
PTPRU-208ENST00000493601 POP5Q969H6 163 aaKnown RBP14.01□□□□□ -0.17
PTPRU-208ENST00000493601 RSRC1Q96IZ7 334 aaKnown RBP14.01□□□□□ -0.17
PTPRU-208ENST00000493601 OR2V2Q96R30 315 aa14.01□□□□□ -0.17
PTPRU-208ENST00000493601 PATZ1Q9HBE1 687 aaKnown RBP14.01□□□□□ -0.17
PTPRU-208ENST00000493601 EGFL7Q9UHF1 273 aa14.01□□□□□ -0.17
PTPRU-208ENST00000493601 COA3Q9Y2R0 106 aaPredicted RBP14.01□□□□□ -0.17
PTPRU-208ENST00000493601 POLR3KQ9Y2Y1 108 aaPredicted RBP14.01□□□□□ -0.17
PTPRU-208ENST00000493601 SOCS2O14508 198 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 PTP4A3O75365 173 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 NCK1P16333 377 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 RHCEP18577 417 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 MDH2P40926 338 aaKnown RBP14□□□□□ -0.17
PTPRU-208ENST00000493601 RPS6KA3P51812 740 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 HNRNPA0Q13151 305 aaKnown RBP14□□□□□ -0.17
PTPRU-208ENST00000493601 ZMYND11Q15326 602 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 ESCO2Q56NI9 601 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 SLC27A4Q6P1M0 643 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 DNM1P34Q6PK57 102 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 RBMS3Q6XE24 437 aaKnown RBP14□□□□□ -0.17
PTPRU-208ENST00000493601 DPY19L2P2Q6ZN68 376 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 TSEN54Q7Z6J9 526 aaKnown RBP14□□□□□ -0.17
PTPRU-208ENST00000493601 MUC20Q8N307 709 aaPredicted RBP14□□□□□ -0.17
PTPRU-208ENST00000493601 DEFB108BQ8NET1 73 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 C22orf15Q8WYQ4 148 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 SLC7A6Q92536 515 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 DVL3Q92997 716 aaPredicted RBP14□□□□□ -0.17
PTPRU-208ENST00000493601 SIGLEC11Q96RL6 698 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 MRI1Q9BV20 369 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 ESM1Q9NQ30 184 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 DDX28Q9NUL7 540 aaKnown RBP14□□□□□ -0.17
PTPRU-208ENST00000493601 NDUFAF4Q9P032 175 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 ABCD2Q9UBJ2 740 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 IL20RAQ9UHF4 553 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 AURKCQ9UQB9 309 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 AUP1Q9Y679 476 aa14□□□□□ -0.17
PTPRU-208ENST00000493601 A8MXK9 166 aa13.99□□□□□ -0.17
PTPRU-208ENST00000493601 F5H0A9 414 aaPredicted RBP13.99□□□□□ -0.17
PTPRU-208ENST00000493601 RER1O15258 196 aa13.99□□□□□ -0.17
PTPRU-208ENST00000493601 CRABP1P29762 137 aa13.99□□□□□ -0.17
PTPRU-208ENST00000493601 OMPP47874 163 aa13.99□□□□□ -0.17
PTPRU-208ENST00000493601 ERFP50548 548 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms