RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 TRAV27A0A087WT01 109 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 OR6C6A6NF89 314 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 FBP2O00757 339 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 GMNNO75496 209 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 ZNF682O95780 498 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 NGFP01138 241 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 IGHV2-70P01814 119 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 CD14P08571 375 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 HKR1P10072 659 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 RAC2P15153 192 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 SELEP16581 610 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 KITLGP21583 273 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 PRTN3P24158 256 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 IL13RA1P78552 427 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 PSG7Q13046 419 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 ZNF154Q13106 437 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 IFI44LQ53G44 452 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 LRRN1Q6UXK5 716 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 MBOAT2Q6ZWT7 520 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 DOK3Q7L591 496 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 ADCK1Q86TW2 530 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 IGFN1Q86VF2 1251 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 LRRC28Q86X40 367 aaPredicted RBP9.78□□□□□ -0.84
COL6A3-213ENST00000493475 GLB1L2Q8IW92 636 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 MICU2Q8IYU8 434 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 ZNF283Q8N7M2 679 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 FAM156AQ8NDB6 213 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 OR13G1Q8NGZ3 307 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 C22orf15Q8WYQ4 148 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 CMBLQ96DG6 245 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 ZNF583Q96ND8 569 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 ZNF582Q96NG8 517 aaPredicted RBP9.78□□□□□ -0.84
COL6A3-213ENST00000493475 ZNF747Q9BV97 191 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 MIOXQ9UGB7 285 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 EGFL7Q9UHF1 273 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 POLR3KQ9Y2Y1 108 aaPredicted RBP9.78□□□□□ -0.84
COL6A3-213ENST00000493475 NOP16Q9Y3C1 178 aaKnown RBP9.78□□□□□ -0.84
COL6A3-213ENST00000493475 CAPN7Q9Y6W3 813 aa9.78□□□□□ -0.84
COL6A3-213ENST00000493475 IGKV1D-43A0A0B4J1Z2 117 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 TEX13CA0A0J9YWL9 993 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 LOC100653049A0A140TA62 436 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 PRSS37A4D1T9 235 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 POM121CA8CG34 1229 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 A8MXK9 166 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 PIP5K1CO60331 668 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 KHDRBS3O75525 346 aaKnown RBP9.77□□□□□ -0.85
COL6A3-213ENST00000493475 KRT34O76011 436 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 NDUFB2O95178 105 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 PPIAL4GP0DN37 164 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 RPS2P15880 293 aaKnown RBP9.77□□□□□ -0.85
COL6A3-213ENST00000493475 CRABP1P29762 137 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 SLC6A9P48067 706 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 RPS6KA3P51812 740 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 CRYBA2P53672 197 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 LSM6P62312 80 aaKnown RBP9.77□□□□□ -0.85
COL6A3-213ENST00000493475 GNB2P62879 340 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 KLF10Q13118 480 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 KRT72Q14CN4 511 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 KCNJ8Q15842 424 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 ZBED5Q49AG3 693 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 C1orf94Q6P1W5 598 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 SIGLECL1Q8N7X8 197 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 OR52E2Q8NGJ4 325 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 APOBEC3DQ96AK3 386 aaPredicted RBP9.77□□□□□ -0.85
COL6A3-213ENST00000493475 HAVCR1Q96D42 359 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 SSBP3Q9BWW4 388 aaPredicted RBP9.77□□□□□ -0.85
COL6A3-213ENST00000493475 HCAR1Q9BXC0 346 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 RERGLQ9H628 205 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 ZNF696Q9H7X3 374 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 OPN4Q9UHM6 478 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 RPS6KA6Q9UK32 745 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 A4GNTQ9UNA3 340 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 INSIG2Q9Y5U4 225 aa9.77□□□□□ -0.85
COL6A3-213ENST00000493475 FXYD1O00168 92 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 FSHBP01225 129 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 CRYBA1P05813 215 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 ZNF12P17014 697 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 SDHAP31040 664 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 CENPAP49450 140 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 RAD23AP54725 363 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 BPIFB3P59826 476 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 MALLQ13021 153 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 KRR1Q13601 381 aaKnown RBP9.76□□□□□ -0.85
COL6A3-213ENST00000493475 ENDOGQ14249 297 aaKnown RBP9.76□□□□□ -0.85
COL6A3-213ENST00000493475 PRR31Q5SQ13 230 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 TMPRSS11FQ6ZWK6 438 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 VASH1Q7L8A9 365 aaPredicted RBP9.76□□□□□ -0.85
COL6A3-213ENST00000493475 ZDHHC22Q8N966 263 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 DEFB108BQ8NET1 73 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 GJC3Q8NFK1 279 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 OR8B3Q8NGG8 313 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 OR13C2Q8NGS9 318 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 OR11L1Q8NGX0 322 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 OR1F12Q8NHA8 337 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 FAM162AQ96A26 154 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 OR2V2Q96R30 315 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 OR8B2Q96RD0 313 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 HOPXQ9BPY8 73 aaPredicted RBP9.76□□□□□ -0.85
COL6A3-213ENST00000493475 HDHD2Q9H0R4 259 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 NMNAT1Q9HAN9 279 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms