RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 EGR3Q06889 387 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 EIF2B1Q14232 305 aaKnown RBP12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 OR2A2Q6IF42 318 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 RPTNQ6XPR3 784 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 NUFIP2Q7Z417 695 aaKnown RBP12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 KCTD20Q7Z5Y7 419 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 CD163Q86VB7 1156 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 ZGRF1Q86YA3 2104 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 FAM57AQ8TBR7 257 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 SLC25A46Q96AG3 418 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 ZNF837Q96EG3 531 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 TM9SF2Q99805 663 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 GPR35Q9HC97 309 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 EMC7Q9NPA0 242 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 SLC7A10Q9NS82 523 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 ASF1BQ9NVP2 202 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 GNG8Q9UK08 70 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 CMAHPQ9Y471 501 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 V9GYH0 126 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 NCOA6Q14686 2063 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 C1QL1O75973 258 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 CDRT1O95170 752 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 IGHV3-9P01782 118 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 KRT8P05787 483 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 TACSTD2P09758 323 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 EDNRAP25101 427 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 TAS2R43P59537 309 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 LSM6P62312 80 aaKnown RBP12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 TPBGQ13641 420 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 SGCAQ16586 387 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 CEACAM16Q2WEN9 425 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 PRR30Q53SZ7 412 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 ZNF684Q5T5D7 378 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 KCTD18Q6PI47 426 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 LINGO2Q7L985 606 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 FAM220AQ7Z4H9 259 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 DCXRQ7Z4W1 244 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 LINC00346Q8IVM7 164 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 GCNT2Q8N0V5 402 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 UFD1Q92890 307 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 PELI1Q96FA3 418 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 MED18Q9BUE0 208 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 ABHD6Q9BV23 337 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 C12orf49Q9H741 205 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 UPB1Q9UBR1 384 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 CYB5R1Q9UHQ9 305 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 IKZF2Q9UKS7 526 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 TBC1D24Q9ULP9 559 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 EMC9Q9Y3B6 208 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 PRR32B1ATL7 298 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 ZNF587BE7ETH6 402 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 RPL36A-HNRNPH2H7BZ11 118 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 PSMD9O00233 223 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 RGS5O15539 181 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 NPR2P20594 1047 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 GBX2P52951 348 aaPredicted RBP12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 GFRALQ6UXV0 394 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 FAM214BQ7L5A3 538 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 OR8H2Q8N162 312 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 UBE2J2Q8N2K1 259 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 C9orf106Q8NAJ2 232 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 IL17RDQ8NFM7 739 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 OR2AJ1Q8NGZ0 328 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 OR52N5Q8NH56 324 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 ST7LQ8TDW4 575 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 NABP1Q96AH0 204 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 AMELYQ99218 206 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 FOXB1Q99853 325 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 SRRQ9GZT4 340 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 ACOXLQ9NUZ1 547 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 TMEM38BQ9NVV0 291 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 C14orf119Q9NWQ9 140 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 NPAP1Q9NZP6 1156 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 MRM2Q9UI43 246 aaKnown RBP12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 ITGB1BP2Q9UKP3 347 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 SF3B6Q9Y3B4 125 aaKnown RBP12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 LHFPL6Q9Y693 200 aa12.4□□□□□ -0.42
PDZRN3-210ENST00000492909 MBD3L4A6NDZ8 208 aaPredicted RBP12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 MBD3L3A6NE82 208 aaPredicted RBP12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 MBD3L5A6NJ08 208 aaPredicted RBP12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 TTLL8A6PVC2 850 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 HOXD4P09016 255 aaPredicted RBP12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 OR8G3PP0DMU2 310 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 CELP19835 753 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 ROM1Q03395 351 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 GUSBP1Q15486 140 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 STK11Q15831 433 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 KCNJ8Q15842 424 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 FAM27BQ5VT28 67 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 CORO6Q6QEF8 472 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 KRT77Q7Z794 578 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 LAX1Q8IWV1 398 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 ZNF679Q8IYX0 411 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 CELF2-AS1Q8N7Q2 184 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 YIPF7Q8N8F6 280 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 ZFP41Q8N8Y5 198 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 MBD3L2Q8NHZ7 208 aaPredicted RBP12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 HAVCR2Q8TDQ0 301 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 OR8B4Q96RC9 309 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 ZNF416Q9BWM5 594 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms