RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 ZNF251Q9BRH9 671 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 POTEKPQ9BYX7 375 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 SLC25A39Q9BZJ4 359 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 PRSS16Q9NQE7 514 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 NAGKQ9UJ70 344 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 ZNF225Q9UK10 706 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 V9GYY9 64 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 GTF3C1Q12789 2109 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 A0A0G2JRQ6 117 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 FABP12A6NFH5 140 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 MKRN2OSH3BPM6 223 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 DYNC1I1O14576 645 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 PPP1R2P9O14990 202 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 SNAI2O43623 268 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 CXCL13O43927 109 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 NPIPB7O75200 414 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 ERLIN2O94905 339 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 OXSR1O95747 527 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 IGKV3-11P04433 115 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 LGALS2P05162 132 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 GIPP09681 153 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 UBTFL1P0CB47 393 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 FOXN2P32314 431 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 SHMT2P34897 504 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 NUDT1P36639 197 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 OPRD1P41143 372 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 AQP2P41181 271 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 CSNK1DP48730 415 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 UBE2MP61081 183 aaKnown RBP3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 KDSRQ06136 332 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 STX5Q13190 355 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 DUSP7Q16829 419 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 KRTAP13-3Q3SY46 172 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 MFSD14CQ5VZR4 134 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 CYB5R2Q6BCY4 276 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 FAM173BQ6P4H8 233 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 SPESP1Q6UW49 350 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 CERS6Q6ZMG9 384 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 ZNF836Q6ZNA1 936 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 MBOAT1Q6ZNC8 495 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 Q6ZSR3 168 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 ZNF571Q7Z3V5 609 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 ZNF547Q8IVP9 402 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 CMTM1Q8IZ96 169 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 OR2L13Q8N349 312 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 MS4A15Q8N5U1 240 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 SEC22AQ96IW7 307 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 SERPINB11Q96P15 392 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 ZYG11BQ9C0D3 744 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 SELENOIQ9C0D9 397 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 SLC38A1Q9H2H9 487 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 C1orf198Q9H425 327 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 REEP4Q9H6H4 257 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 BEX1Q9HBH7 125 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 NECAP2Q9NVZ3 263 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 ZNF282Q9UDV7 671 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 NUFIP1Q9UHK0 495 aaKnown RBP3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 CLEC2DQ9UHP7 191 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 ERVW-1Q9UQF0 538 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 SLC17A4Q9Y2C5 497 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 KCNIP3Q9Y2W7 256 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 YARS2Q9Y2Z4 477 aaKnown RBP3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 HYOU1Q9Y4L1 999 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 FADS3Q9Y5Q0 445 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 TSSC4Q9Y5U2 329 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 UBN2Q6ZU65 1347 aa3.19□□□□□ -1.9
HMGB1P38-201ENST00000490557 POLR3AO14802 1390 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 A6NDX4 124 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 SMIM23A6NLE4 172 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 TRDCB7Z8K6 153 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 PRMT5O14744 637 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 MAGEB4O15481 346 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 SOX15O60248 233 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 EIF4E2O60573 245 aaKnown RBP3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 SC5DO75845 299 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 OR7A10O76100 309 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 C1orf105O95561 183 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 LDOC1O95751 146 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 KLK1P06870 262 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 RD3LP0DJH9 198 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 CNR1P21554 472 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 IVDP26440 423 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 KDELR2P33947 212 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 CTRLP40313 264 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 VHLP40337 213 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 PPP1R2P41236 205 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 KPNA2P52292 529 aaKnown RBP3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 MLF1P58340 268 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 TAS2R19P59542 299 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 DSTNP60981 165 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 UBE2KP61086 200 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 B2MP61769 119 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 UNC119Q13432 240 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 GNMTQ14749 295 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 TRAM2Q15035 370 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 SF3A2Q15428 464 aaKnown RBP3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 TNXAQ16473 311 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 NSUN5P1Q3KNT7 163 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 TMEM31Q5JXX7 168 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 TPRG1LQ5T0D9 272 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms