RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 FAM122BQ7Z309 247 aa13.19□□□□□ -0.3
NUP58-213ENST00000490231 SIGLECL1Q8N7X8 197 aa13.19□□□□□ -0.3
NUP58-213ENST00000490231 PTP4A1Q93096 173 aa13.19□□□□□ -0.3
NUP58-213ENST00000490231 Q96M85 177 aa13.19□□□□□ -0.3
NUP58-213ENST00000490231 MRI1Q9BV20 369 aa13.19□□□□□ -0.3
NUP58-213ENST00000490231 ZNF747Q9BV97 191 aa13.19□□□□□ -0.3
NUP58-213ENST00000490231 NDEL1Q9GZM8 345 aa13.19□□□□□ -0.3
NUP58-213ENST00000490231 ANKRD19PQ9H560 264 aa13.19□□□□□ -0.3
NUP58-213ENST00000490231 CMTM6Q9NX76 183 aa13.19□□□□□ -0.3
NUP58-213ENST00000490231 ATPIF1Q9UII2 106 aa13.19□□□□□ -0.3
NUP58-213ENST00000490231 TANC2Q9HCD6 1990 aa13.19□□□□□ -0.3
NUP58-213ENST00000490231 IFNL4K9M1U5 179 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 SLC22A2O15244 555 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 RAC2P15153 192 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 CTLA4P16410 223 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 ZNF26P17031 533 aaPredicted RBP13.18□□□□□ -0.3
NUP58-213ENST00000490231 CPT2P23786 658 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 PRTN3P24158 256 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 MDH2P40926 338 aaKnown RBP13.18□□□□□ -0.3
NUP58-213ENST00000490231 GPR4P46093 362 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 SEC61A1P61619 476 aaKnown RBP13.18□□□□□ -0.3
NUP58-213ENST00000490231 LSM6P62312 80 aaKnown RBP13.18□□□□□ -0.3
NUP58-213ENST00000490231 GUCY1A3Q02108 690 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 ZMYND11Q15326 602 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 IFI44LQ53G44 452 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 KLF17Q5JT82 389 aaPredicted RBP13.18□□□□□ -0.3
NUP58-213ENST00000490231 CGB2Q6NT52 195 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 TBPL2Q6SJ96 375 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 CBLL1Q75N03 491 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 MUC20Q8N307 709 aaPredicted RBP13.18□□□□□ -0.3
NUP58-213ENST00000490231 ITLN1Q8WWA0 313 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 ZNF570Q96NI8 536 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 OR2V2Q96R30 315 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 FGFR1OP2Q9NVK5 253 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 ZNF69Q9UC07 566 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 TMEM5Q9Y2B1 443 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 CAPN7Q9Y6W3 813 aa13.18□□□□□ -0.3
NUP58-213ENST00000490231 OR6C6A6NF89 314 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 TMEM178BH3BS89 294 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 CXCR6O00574 342 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 ZNF682O95780 498 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 RBMXP38159 391 aaKnown RBP13.17□□□□□ -0.3
NUP58-213ENST00000490231 RGS6P49758 472 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 ERFP50548 548 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 ESCO2Q56NI9 601 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 PRR31Q5SQ13 230 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 GPR139Q6DWJ6 353 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 SLC27A4Q6P1M0 643 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 SHISA2Q6UWI4 295 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 FBXW12Q6X9E4 464 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 RRM2BQ7LG56 351 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 GLB1L2Q8IW92 636 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 SLC15A3Q8IY34 581 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 RCN3Q96D15 328 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 NMNAT1Q9HAN9 279 aaPredicted RBP13.17□□□□□ -0.3
NUP58-213ENST00000490231 GCM1Q9NP62 436 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 NRIP3Q9NQ35 241 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 ARGLU1Q9NWB6 273 aaPredicted RBP13.17□□□□□ -0.3
NUP58-213ENST00000490231 VSX1Q9NZR4 365 aaPredicted RBP13.17□□□□□ -0.3
NUP58-213ENST00000490231 GMPR2Q9P2T1 348 aaKnown RBP13.17□□□□□ -0.3
NUP58-213ENST00000490231 ASH2LQ9UBL3 628 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 LRCH1Q9Y2L9 728 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 PCDHGB1Q9Y5G3 927 aa13.17□□□□□ -0.3
NUP58-213ENST00000490231 DNAJC9-AS1A6NH13 148 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 SLC16A7O60669 478 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 PTP4A3O75365 173 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 KHDRBS3O75525 346 aaKnown RBP13.16□□□□□ -0.3
NUP58-213ENST00000490231 NDUFB2O95178 105 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 PPIAL4GP0DN37 164 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 SDHAP31040 664 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 MMP16P51512 607 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 LIPEQ05469 1076 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 PAX8Q06710 450 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 KRR1Q13601 381 aaKnown RBP13.16□□□□□ -0.3
NUP58-213ENST00000490231 CCDC92Q53HC0 331 aaPredicted RBP13.16□□□□□ -0.3
NUP58-213ENST00000490231 C1orf94Q6P1W5 598 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 FKBP9P1Q75LS8 142 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 CYP4Z1Q86W10 505 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 OR1F12Q8NHA8 337 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 RP9Q8TA86 221 aaKnown RBP13.16□□□□□ -0.3
NUP58-213ENST00000490231 SLC7A13Q8TCU3 470 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 SLC7A6Q92536 515 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 RASD2Q96D21 266 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 HSH2DQ96JZ2 352 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 GPX7Q96SL4 187 aaPredicted RBP13.16□□□□□ -0.3
NUP58-213ENST00000490231 SYT4Q9H2B2 425 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 ZNF696Q9H7X3 374 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 OR5V1Q9UGF6 321 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 IL20RAQ9UHF4 553 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 SIGLEC7Q9Y286 467 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 COA3Q9Y2R0 106 aaPredicted RBP13.16□□□□□ -0.3
NUP58-213ENST00000490231 MEGF8Q7Z7M0 2845 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 DYSFO75923 2080 aa13.16□□□□□ -0.3
NUP58-213ENST00000490231 CEACAM18A8MTB9 384 aa13.15□□□□□ -0.3
NUP58-213ENST00000490231 GSTA4O15217 222 aa13.15□□□□□ -0.3
NUP58-213ENST00000490231 TMPRSS2O15393 492 aa13.15□□□□□ -0.3
NUP58-213ENST00000490231 SERPINA1P01009 418 aa13.15□□□□□ -0.3
NUP58-213ENST00000490231 WNT2P09544 360 aa13.15□□□□□ -0.3
NUP58-213ENST00000490231 H2AFXP16104 143 aaPredicted RBP13.15□□□□□ -0.3
NUP58-213ENST00000490231 SF3A3Q12874 501 aaKnown RBP eCLIP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms