RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 HTR1FP30939 366 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 KDELR2P33947 212 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 COILP38432 576 aaPredicted RBP2.55□□□□□ -2
DEPDC1-204ENST00000489862 RBM34P42696 430 aaKnown RBP2.55□□□□□ -2
DEPDC1-204ENST00000489862 BTDP43251 543 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 TCP10Q12799 353 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 MS4A13Q5J8X5 152 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 SAPCD1Q5SSQ6 148 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 CLVS2Q5SYC1 327 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 ANKRD26P1Q6NSI1 321 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 CLEC18BQ6UXF7 455 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 APOOLQ6UXV4 268 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 RBMS3Q6XE24 437 aaKnown RBP2.55□□□□□ -2
DEPDC1-204ENST00000489862 TMPRSS11AQ6ZMR5 421 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 TPGS1Q6ZTW0 290 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 OR2W3Q7Z3T1 314 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 DCXRQ7Z4W1 244 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 SPAG16Q8N0X2 631 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 TMEM156Q8N614 296 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 OR5K2Q8NHB8 316 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 ZNF502Q8TBZ5 544 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 ZNF564Q8TBZ8 553 aaPredicted RBP2.55□□□□□ -2
DEPDC1-204ENST00000489862 CDKL2Q92772 493 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 SMARCD2Q92925 531 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 C11orf52Q96A22 123 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 CENPNQ96H22 339 aaPredicted RBP2.55□□□□□ -2
DEPDC1-204ENST00000489862 NOL4LQ96MY1 436 aaPredicted RBP2.55□□□□□ -2
DEPDC1-204ENST00000489862 MBOAT7Q96N66 472 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 SORT1Q99523 831 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 HSD17B14Q9BPX1 270 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 RAB34Q9BZG1 259 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 PATZ1Q9HBE1 687 aaKnown RBP2.55□□□□□ -2
DEPDC1-204ENST00000489862 SH2D2AQ9NP31 389 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 ISYNA1Q9NPH2 558 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 ZNF71Q9NQZ8 489 aaPredicted RBP2.55□□□□□ -2
DEPDC1-204ENST00000489862 TREX1Q9NSU2 369 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 NKIRAS1Q9NYS0 192 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 GALPQ9UBC7 116 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 MLXQ9UH92 298 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 RSPH14Q9UHP6 348 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 GNPTGQ9UJJ9 305 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 MMP17Q9ULZ9 603 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 PSMD13Q9UNM6 376 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 SIPA1L1O43166 1804 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 PAPPA2Q9BXP8 1791 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 MYH2Q9UKX2 1941 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 CDK5RAP2Q96SN8 1893 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 ZNF532Q9HCE3 1301 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 DOCK2Q92608 1830 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 A0A1B0GTH9 108 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 GOLGA8IPA6NC78 632 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 IGLON5A6NGN9 336 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 H3BN98 237 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 DCTN6O00399 190 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 TNRC18O15417 2968 aaPredicted RBP2.54□□□□□ -2
DEPDC1-204ENST00000489862 SCRG1O75711 98 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 NXPH4O95158 308 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 TNFAIP8O95379 198 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 FADS2O95864 444 aaKnown RBP2.54□□□□□ -2
DEPDC1-204ENST00000489862 CATP04040 527 aaKnown RBP2.54□□□□□ -2
DEPDC1-204ENST00000489862 FOLR1P15328 257 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 PAX1P15863 534 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 BGNP21810 368 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 OPRL1P41146 370 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 ERVPABLB-1P60509 514 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 PAFAH1B2P68402 229 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 VLDLRP98155 873 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 IL9RQ01113 521 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 CYLC2Q14093 348 aaPredicted RBP2.54□□□□□ -2
DEPDC1-204ENST00000489862 ECSCRQ19T08 205 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 DEFB115Q30KQ5 88 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 EIPR1Q53HC9 387 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 COQ5Q5HYK3 327 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 LINC00242Q5T6M2 205 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 FKBP1CQ5VVH2 108 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 TRIM40Q6P9F5 258 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 AHSA2Q719I0 299 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 IFNEQ86WN2 208 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 ZNF677Q86XU0 584 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 ZBED8Q8IZ13 594 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 PUSL1Q8N0Z8 303 aaKnown RBP2.54□□□□□ -2
DEPDC1-204ENST00000489862 ABHD12Q8N2K0 398 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 C2orf73Q8N5S3 287 aaPredicted RBP2.54□□□□□ -2
DEPDC1-204ENST00000489862 LRRC52Q8N7C0 313 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 SNX31Q8N9S9 440 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 OR2L5Q8NG80 312 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 OR5AR1Q8NGP9 310 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 RNASEH2CQ8TDP1 164 aaKnown RBP2.54□□□□□ -2
DEPDC1-204ENST00000489862 TMEM239Q8WW34 195 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 FAM151AQ8WW52 585 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 ZNRF4Q8WWF5 429 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 TRUB1Q8WWH5 349 aaKnown RBP2.54□□□□□ -2
DEPDC1-204ENST00000489862 OR5P2Q8WZ92 322 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 DCPSQ96C86 337 aaKnown RBP2.54□□□□□ -2
DEPDC1-204ENST00000489862 CMTM5Q96DZ9 223 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 MS4A14Q96JA4 679 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 ZNF354BQ96LW1 612 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 SERPINB12Q96P63 405 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 OR8B4Q96RC9 309 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 SPZ1Q9BXG8 430 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms