RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 CREBBPQ92793 2442 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 IGLV3-9A0A075B6K5 115 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 FAM183AA6NL82 134 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 EI24O14681 340 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 RER1O15258 196 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 MITFO75030 526 aaPredicted RBP9.54□□□□□ -0.88
CPSF7-212ENST00000489728 ERCC1P07992 297 aaPredicted RBP9.54□□□□□ -0.88
CPSF7-212ENST00000489728 ZNF250P15622 560 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 SLC2A5P22732 501 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 EFNB1P98172 346 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 MOGQ16653 247 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 MEP1BQ16820 701 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 MST1LQ2TV78 715 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 KRTAP27-1Q3LI81 207 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 LCN1P1Q5VSP4 162 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 RGS7BPQ6MZT1 257 aaPredicted RBP9.54□□□□□ -0.88
CPSF7-212ENST00000489728 PLBD1Q6P4A8 553 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 VHLLQ6RSH7 139 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 CXXC5Q7LFL8 322 aaKnown RBP9.54□□□□□ -0.88
CPSF7-212ENST00000489728 SHFQ7M4L6 423 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 PAQR4Q8N4S7 273 aaPredicted RBP9.54□□□□□ -0.88
CPSF7-212ENST00000489728 OR6K6Q8NGW6 343 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 C4orf45Q96LM5 186 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 RDH12Q96NR8 316 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 INTS14Q96SY0 518 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 ATF6BQ99941 703 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 CACNG6Q9BXT2 260 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 HINT3Q9NQE9 182 aaKnown RBP9.54□□□□□ -0.88
CPSF7-212ENST00000489728 DDX28Q9NUL7 540 aaKnown RBP9.54□□□□□ -0.88
CPSF7-212ENST00000489728 TVP23BQ9NYZ1 205 aa9.54□□□□□ -0.88
CPSF7-212ENST00000489728 CGGBP1Q9UFW8 167 aaPredicted RBP9.54□□□□□ -0.88
CPSF7-212ENST00000489728 GDF2Q9UK05 429 aaPredicted RBP9.54□□□□□ -0.88
CPSF7-212ENST00000489728 PRRC2AP48634 2157 aaKnown RBP9.54□□□□□ -0.88
CPSF7-212ENST00000489728 FAM171A2A8MVW0 826 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 GPRIN2O60269 458 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 ABHD16AO95870 558 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 GPANK1O95872 356 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 GYPBP06028 91 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 CLUP10909 449 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 CCL2P13500 99 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 CCNOP22674 350 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 GSTT1P30711 240 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 OTX1P32242 354 aaPredicted RBP9.53□□□□□ -0.88
CPSF7-212ENST00000489728 WNT5AP41221 380 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 NUDT6P53370 316 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 ATP5J2P56134 94 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 KLF3P57682 345 aaPredicted RBP9.53□□□□□ -0.88
CPSF7-212ENST00000489728 NXNL2Q5VZ03 156 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 MBNL2Q5VZF2 373 aaKnown RBP9.53□□□□□ -0.88
CPSF7-212ENST00000489728 TMEM236Q5W0B7 351 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 CFAP77Q6ZQR2 320 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 CPOQ8IVL8 374 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 GID4Q8IVV7 300 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 TIGD4Q8IY51 512 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 CBR4Q8N4T8 237 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 ZNF454Q8N9F8 522 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 OR8J1Q8NGP2 316 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 SYNPRQ8TBG9 265 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 TMEM163Q8TC26 289 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 ZNRF4Q8WWF5 429 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 TRUB1Q8WWH5 349 aaKnown RBP9.53□□□□□ -0.88
CPSF7-212ENST00000489728 EME1Q96AY2 570 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 HRASLS5Q96KN8 279 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 PITX2Q99697 317 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 DOK1Q99704 481 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 HCAR1Q9BXC0 346 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 MS4A5Q9H3V2 200 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 MYOZ1Q9NP98 299 aaPredicted RBP9.53□□□□□ -0.88
CPSF7-212ENST00000489728 PNRC2Q9NPJ4 139 aaKnown RBP9.53□□□□□ -0.88
CPSF7-212ENST00000489728 SLCO1C1Q9NYB5 712 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 ITGB1BP2Q9UKP3 347 aa9.53□□□□□ -0.88
CPSF7-212ENST00000489728 AKAP9Q99996 3911 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 TMEM129A0AVI4 362 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 TVP23AA6NH52 213 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 SLC22A31A6NKX4 558 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 ZNF878C9JN71 531 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 E9PQ18 207 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 M0R233 179 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 ZNF593O00488 134 aaPredicted RBP9.52□□□□□ -0.89
CPSF7-212ENST00000489728 PRKYO43930 277 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 IGHV3-13P01766 116 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 MT-ND5P03915 603 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 LCKP06239 509 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 SPARCP09486 303 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 CSF3P09919 207 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 FAM157BP0CG42 384 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 EPHA2P29317 976 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 SLC15A1P46059 708 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 EFNA4P52798 201 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 DSCR9P59020 149 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 CDC42P60953 191 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 PPP1CBP62140 327 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 TMED1Q13445 227 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 GGTLC2Q14390 218 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 ZNF718Q3SXZ3 478 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 ZMAT1Q5H9K5 638 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 Q5PR19 223 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 CORO6Q6QEF8 472 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 COLCA1Q6ZS62 124 aa9.52□□□□□ -0.89
CPSF7-212ENST00000489728 ZBTB49Q6ZSB9 765 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms