RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 KLHDC2Q9Y2U9 406 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 AMDHD2Q9Y303 409 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 LHFPL6Q9Y693 200 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 ZNF32P17041 273 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 ETV1P50549 477 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 PCBD1P61457 104 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 AQP6Q13520 282 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 SSX6Q7RTT6 188 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 DCXRQ7Z4W1 244 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 WFDC8Q8IUA0 241 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 ALDH16A1Q8IZ83 802 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 SPARTQ8N0X7 666 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 SIGLEC11Q96RL6 698 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 OBP2BQ9NPH6 170 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 ERVK13-1Q9NX77 482 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 SNX5Q9Y5X3 404 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 SLC25A15Q9Y619 301 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 HEATR1Q9H583 2144 aaKnown RBP12.42□□□□□ -0.42
CLDN11-209ENST00000489485 ARPC4-TTLL3A0A0A6YYG9 625 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 PSMD9O00233 223 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 MAGEB4O15481 346 aaPredicted RBP12.42□□□□□ -0.42
CLDN11-209ENST00000489485 LIMS3P0CW19 117 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 LIMS4P0CW20 117 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 ALOX5APP20292 161 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 ACTC1P68032 377 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 ACTA1P68133 377 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 ZNF85Q03923 595 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 EIF2B1Q14232 305 aaKnown RBP12.42□□□□□ -0.42
CLDN11-209ENST00000489485 PCK2Q16822 640 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 TEX30Q5JUR7 227 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 ZNF773Q6PK81 442 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 MDP1Q86V88 176 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 AMELYQ99218 206 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 CDCA4Q9BXL8 241 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 CHCHD3Q9NX63 227 aaKnown RBP12.42□□□□□ -0.42
CLDN11-209ENST00000489485 B3GNT2Q9NY97 397 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 TIMM10BQ9Y5J6 103 aa12.42□□□□□ -0.42
CLDN11-209ENST00000489485 A0A087WXM4 84 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 RER1O15258 196 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 CLDN1O95832 211 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 MMP7P09237 267 aaPredicted RBP12.41□□□□□ -0.42
CLDN11-209ENST00000489485 ARR3P36575 388 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 KIR2DL3P43628 341 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 MAP2K4P45985 399 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 EMX1Q04741 257 aaPredicted RBP12.41□□□□□ -0.42
CLDN11-209ENST00000489485 SLC18B1Q6NT16 456 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 TMEM53Q6P2H8 277 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 SPATC1Q76KD6 591 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 DPPA2Q7Z7J5 298 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 SYT9Q86SS6 491 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 GJC3Q8NFK1 279 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 MAP6Q96JE9 813 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 ZNF649Q9BS31 505 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 ABHD6Q9BV23 337 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 ALG8Q9BVK2 526 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 NOX3Q9HBY0 568 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 PLEK2Q9NYT0 353 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 ERGIC3Q9Y282 383 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 TMEM14AQ9Y6G1 99 aa12.41□□□□□ -0.42
CLDN11-209ENST00000489485 PKDREJQ9NTG1 2253 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 ZNF670-ZNF695F2Z2N8 137 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 CASKO14936 926 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 THBDP07204 575 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 SMIM18P0DKX4 95 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 ZNF83P51522 516 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 PSG4Q00888 419 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 SCRN3Q0VDG4 424 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 GALEQ14376 348 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 PABPC1L2AQ5JQF8 200 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 OR2G6Q5TZ20 316 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 ZNF322Q6U7Q0 402 aaPredicted RBP12.4□□□□□ -0.42
CLDN11-209ENST00000489485 CFAP77Q6ZQR2 320 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 AKR7LQ8NHP1 331 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 ST7LQ8TDW4 575 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 SNX33Q8WV41 574 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 JAM3Q9BX67 310 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 OR2H1Q9GZK4 316 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 INPP5EQ9NRR6 644 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 PTTG2Q9NZH5 202 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 GDF2Q9UK05 429 aaPredicted RBP12.4□□□□□ -0.42
CLDN11-209ENST00000489485 EXOSC1Q9Y3B2 195 aaKnown RBP12.4□□□□□ -0.42
CLDN11-209ENST00000489485 PRR32B1ATL7 298 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 MYL12BO14950 172 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 SGCEO43556 437 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 IDH3GP51553 393 aaPredicted RBP12.4□□□□□ -0.42
CLDN11-209ENST00000489485 NR1H2P55055 460 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 PLP2Q04941 152 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 LSAMPQ13449 338 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 RAB39AQ14964 217 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 ZNF774Q6NX45 483 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 MEX3BQ6ZN04 569 aaKnown RBP12.4□□□□□ -0.42
CLDN11-209ENST00000489485 SSX8Q7RTT4 187 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 SATL1Q86VE3 508 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 DMRTC2Q8IXT2 367 aaPredicted RBP12.4□□□□□ -0.42
CLDN11-209ENST00000489485 ZNF454Q8N9F8 522 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 MS4A3Q96HJ5 214 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 DACH2Q96NX9 599 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 MNTQ99583 582 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 WACQ9BTA9 647 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 C1orf198Q9H425 327 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms