RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 TEKQ02763 1124 aa11.48□□□□□ -0.57
CCL28-202ENST00000489442 MEP1BQ16820 701 aa11.48□□□□□ -0.57
CCL28-202ENST00000489442 TMEM154Q6P9G4 183 aa11.48□□□□□ -0.57
CCL28-202ENST00000489442 VASH1Q7L8A9 365 aaPredicted RBP11.48□□□□□ -0.57
CCL28-202ENST00000489442 ZBTB46Q86UZ6 589 aa11.48□□□□□ -0.57
CCL28-202ENST00000489442 LNX2Q8N448 690 aa11.48□□□□□ -0.57
CCL28-202ENST00000489442 ZNF540Q8NDQ6 660 aa11.48□□□□□ -0.57
CCL28-202ENST00000489442 OR2T4Q8NH00 348 aa11.48□□□□□ -0.57
CCL28-202ENST00000489442 OR1F12Q8NHA8 337 aa11.48□□□□□ -0.57
CCL28-202ENST00000489442 UBASH3BQ8TF42 649 aa11.48□□□□□ -0.57
CCL28-202ENST00000489442 KLHL21Q9UJP4 597 aa11.48□□□□□ -0.57
CCL28-202ENST00000489442 PLSCR5A0PG75 271 aa11.47□□□□□ -0.57
CCL28-202ENST00000489442 ARRDC5A6NEK1 342 aa11.47□□□□□ -0.57
CCL28-202ENST00000489442 RIIAD1A6NNX1 92 aa11.47□□□□□ -0.57
CCL28-202ENST00000489442 RER1O15258 196 aa11.47□□□□□ -0.57
CCL28-202ENST00000489442 TPD52L2O43399 206 aaKnown RBP11.47□□□□□ -0.57
CCL28-202ENST00000489442 DEAF1O75398 565 aaPredicted RBP11.47□□□□□ -0.57
CCL28-202ENST00000489442 CIB2O75838 187 aa11.47□□□□□ -0.57
CCL28-202ENST00000489442 NGFP01138 241 aa11.47□□□□□ -0.57
CCL28-202ENST00000489442 GAAP10253 952 aa11.47□□□□□ -0.57
CCL28-202ENST00000489442 DBPQ10586 325 aaPredicted RBP11.47□□□□□ -0.57
CCL28-202ENST00000489442 CORO6Q6QEF8 472 aa11.47□□□□□ -0.57
CCL28-202ENST00000489442 CD300LDQ6UXZ3 194 aa11.47□□□□□ -0.57
CCL28-202ENST00000489442 CCDC121Q6ZUS5 278 aa11.47□□□□□ -0.57
CCL28-202ENST00000489442 TMEM179BQ7Z7N9 219 aa11.47□□□□□ -0.57
CCL28-202ENST00000489442 ATG16L2Q8NAA4 619 aa11.47□□□□□ -0.57
CCL28-202ENST00000489442 SLC37A3Q8NCC5 494 aa11.47□□□□□ -0.57
CCL28-202ENST00000489442 PAPD5Q8NDF8 572 aaKnown RBP11.47□□□□□ -0.57
CCL28-202ENST00000489442 SLC26A10Q8NG04 563 aa11.47□□□□□ -0.57
CCL28-202ENST00000489442 SLC25A40Q8TBP6 338 aa11.47□□□□□ -0.57
CCL28-202ENST00000489442 OTULINQ96BN8 352 aa11.47□□□□□ -0.57
CCL28-202ENST00000489442 OR2J1Q9GZK6 312 aa11.47□□□□□ -0.57
CCL28-202ENST00000489442 HINT3Q9NQE9 182 aaKnown RBP11.47□□□□□ -0.57
CCL28-202ENST00000489442 KIF17Q9P2E2 1029 aa11.47□□□□□ -0.57
CCL28-202ENST00000489442 LHFPL6Q9Y693 200 aa11.47□□□□□ -0.57
CCL28-202ENST00000489442 IGLV3-9A0A075B6K5 115 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 OR6C6A6NF89 314 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 TIPRLO75663 272 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 IGHV3-13P01766 116 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 TFP02787 698 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 ANXA8P13928 327 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 ZNF3P17036 446 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 USF1P22415 310 aaPredicted RBP11.46□□□□□ -0.57
CCL28-202ENST00000489442 PRKACGP22612 351 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 PYCR1P32322 319 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 GGTLC2Q14390 218 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 CCDC92Q53HC0 331 aaPredicted RBP11.46□□□□□ -0.57
CCL28-202ENST00000489442 RFPL4BQ6ZWI9 263 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 LINC00346Q8IVM7 164 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 OR51L1Q8NGJ5 315 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 OR9Q1Q8NGQ5 310 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 OR4Q3Q8NH05 313 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 KLF14Q8TD94 323 aaPredicted RBP11.46□□□□□ -0.57
CCL28-202ENST00000489442 SLC7A6Q92536 515 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 SLCO4A1Q96BD0 722 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 MARS2Q96GW9 593 aaKnown RBP11.46□□□□□ -0.57
CCL28-202ENST00000489442 COG8Q96MW5 612 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 PITX2Q99697 317 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 TEX12Q9BXU0 123 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 HDHD2Q9H0R4 259 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 TBCCD1Q9NVR7 557 aa11.46□□□□□ -0.57
CCL28-202ENST00000489442 JMJD1CQ15652 2540 aa11.46□□□□□ -0.58
CCL28-202ENST00000489442 TVP23AA6NH52 213 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 C17orf100A8MU93 164 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 ICMTO60725 284 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 PAICSP22234 425 aaKnown RBP11.45□□□□□ -0.58
CCL28-202ENST00000489442 TUBG1P23258 451 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 FMO3P31513 532 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 MPV17P39210 176 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 NR4A2P43354 598 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 RGS6P49758 472 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 PPP2R2BQ00005 443 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 LOXL1Q08397 574 aaPredicted RBP11.45□□□□□ -0.58
CCL28-202ENST00000489442 CRMP1Q14194 572 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 PCGF3Q3KNV8 242 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 ELFN2Q5R3F8 820 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 ZNF362Q5T0B9 420 aaPredicted RBP11.45□□□□□ -0.58
CCL28-202ENST00000489442 MBNL2Q5VZF2 373 aaKnown RBP11.45□□□□□ -0.58
CCL28-202ENST00000489442 SLC27A4Q6P1M0 643 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 HS3ST5Q8IZT8 346 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 ZNF786Q8N393 782 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 IQCF1Q8N6M8 205 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 IPCEF1Q8WWN9 437 aaPredicted RBP11.45□□□□□ -0.58
CCL28-202ENST00000489442 DCLRE1CQ96SD1 692 aaKnown RBP11.45□□□□□ -0.58
CCL28-202ENST00000489442 TUBG2Q9NRH3 451 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 DECR2Q9NUI1 292 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 ATPIF1Q9UII2 106 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 KCNG2Q9UJ96 466 aa11.45□□□□□ -0.58
CCL28-202ENST00000489442 FN1P02751 2386 aaKnown RBP11.45□□□□□ -0.58
CCL28-202ENST00000489442 LYNX1G3V0Z9 82 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 H3BSA7 217 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 TIMM8AO60220 97 aaPredicted RBP11.44□□□□□ -0.58
CCL28-202ENST00000489442 HPXP02790 462 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 GYPBP06028 91 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 DBHP09172 617 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 LYNX1P0DP58 116 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 OSMP13725 252 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 FASP25445 335 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 GRK5P34947 590 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 LIPAP38571 399 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms