RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 TMIGD3P0DMS9 266 aaPredicted RBP8.8□□□□□ -1
USP11-211ENST00000489111 CD8BP10966 210 aa8.8□□□□□ -1
USP11-211ENST00000489111 MPGP29372 298 aa8.8□□□□□ -1
USP11-211ENST00000489111 DCTDP32321 178 aa8.8□□□□□ -1
USP11-211ENST00000489111 CCR9P51686 369 aa8.8□□□□□ -1
USP11-211ENST00000489111 NANOS3P60323 173 aaKnown RBP8.8□□□□□ -1
USP11-211ENST00000489111 PSMA6P60900 246 aaKnown RBP8.8□□□□□ -1
USP11-211ENST00000489111 TUBA1BP68363 451 aa8.8□□□□□ -1
USP11-211ENST00000489111 TGFBR3Q03167 851 aa8.8□□□□□ -1
USP11-211ENST00000489111 MFGE8Q08431 387 aaPredicted RBP8.8□□□□□ -1
USP11-211ENST00000489111 ECH1Q13011 328 aa8.8□□□□□ -1
USP11-211ENST00000489111 RAB35Q15286 201 aa8.8□□□□□ -1
USP11-211ENST00000489111 GUSBP1Q15486 140 aa8.8□□□□□ -1
USP11-211ENST00000489111 SLC36A2Q495M3 483 aa8.8□□□□□ -1
USP11-211ENST00000489111 YIF1BQ5BJH7 314 aa8.8□□□□□ -1
USP11-211ENST00000489111 ELFN2Q5R3F8 820 aa8.8□□□□□ -1
USP11-211ENST00000489111 FDX2Q6P4F2 183 aa8.8□□□□□ -1
USP11-211ENST00000489111 PAMR1Q6UXH9 720 aa8.8□□□□□ -1
USP11-211ENST00000489111 TFAP2EQ6VUC0 442 aa8.8□□□□□ -1
USP11-211ENST00000489111 TUBA1AQ71U36 451 aa8.8□□□□□ -1
USP11-211ENST00000489111 RHOUQ7L0Q8 258 aa8.8□□□□□ -1
USP11-211ENST00000489111 OR10S1Q8NGN2 331 aa8.8□□□□□ -1
USP11-211ENST00000489111 SPTSSAQ969W0 71 aa8.8□□□□□ -1
USP11-211ENST00000489111 FBXO17Q96EF6 278 aa8.8□□□□□ -1
USP11-211ENST00000489111 PGLYRP3Q96LB9 341 aa8.8□□□□□ -1
USP11-211ENST00000489111 TSC22D3Q99576 134 aa8.8□□□□□ -1
USP11-211ENST00000489111 PDCD1LG2Q9BQ51 273 aa8.8□□□□□ -1
USP11-211ENST00000489111 WACQ9BTA9 647 aa8.8□□□□□ -1
USP11-211ENST00000489111 HDHD2Q9H0R4 259 aa8.8□□□□□ -1
USP11-211ENST00000489111 MOB1AQ9H8S9 216 aa8.8□□□□□ -1
USP11-211ENST00000489111 TXNL4BQ9NX01 149 aaKnown RBP8.8□□□□□ -1
USP11-211ENST00000489111 PLEK2Q9NYT0 353 aa8.8□□□□□ -1
USP11-211ENST00000489111 FRRS1LQ9P0K9 344 aa8.8□□□□□ -1
USP11-211ENST00000489111 FBXL3Q9UKT7 428 aa8.8□□□□□ -1
USP11-211ENST00000489111 PROCRQ9UNN8 238 aa8.8□□□□□ -1
USP11-211ENST00000489111 TIMM10BQ9Y5J6 103 aa8.8□□□□□ -1
USP11-211ENST00000489111 FAM215AQ9Y5M1 114 aa8.8□□□□□ -1
USP11-211ENST00000489111 MED12Q93074 2177 aa8.8□□□□□ -1
USP11-211ENST00000489111 A0A096LPE4 126 aa8.79□□□□□ -1
USP11-211ENST00000489111 A0A1W2PPZ6 126 aa8.79□□□□□ -1
USP11-211ENST00000489111 ZNF879B4DU55 563 aa8.79□□□□□ -1
USP11-211ENST00000489111 ERVH48-1M5A8F1 160 aa8.79□□□□□ -1
USP11-211ENST00000489111 ZFPL1O95159 310 aa8.79□□□□□ -1
USP11-211ENST00000489111 CNOT4O95628 575 aaKnown RBP8.79□□□□□ -1
USP11-211ENST00000489111 APOC1P02654 83 aa8.79□□□□□ -1
USP11-211ENST00000489111 EDN3P14138 238 aa8.79□□□□□ -1
USP11-211ENST00000489111 ZNF182P17025 639 aaPredicted RBP8.79□□□□□ -1
USP11-211ENST00000489111 MYL9P24844 172 aa8.79□□□□□ -1
USP11-211ENST00000489111 MAPK3P27361 379 aaPredicted RBP8.79□□□□□ -1
USP11-211ENST00000489111 PCSK6P29122 969 aa8.79□□□□□ -1
USP11-211ENST00000489111 HOXC12P31275 282 aa8.79□□□□□ -1
USP11-211ENST00000489111 FGF9P31371 208 aaPredicted RBP8.79□□□□□ -1
USP11-211ENST00000489111 SOX6P35712 828 aa8.79□□□□□ -1
USP11-211ENST00000489111 UGT2B10P36537 528 aa8.79□□□□□ -1
USP11-211ENST00000489111 TGFBR1P36897 503 aa8.79□□□□□ -1
USP11-211ENST00000489111 KIR2DL2P43627 348 aaPredicted RBP8.79□□□□□ -1
USP11-211ENST00000489111 KIR3DL2P43630 455 aa8.79□□□□□ -1
USP11-211ENST00000489111 CX3CR1P49238 355 aa8.79□□□□□ -1
USP11-211ENST00000489111 PRKXP51817 358 aa8.79□□□□□ -1
USP11-211ENST00000489111 CASP6P55212 293 aa8.79□□□□□ -1
USP11-211ENST00000489111 HIST1H3AP68431 136 aa8.79□□□□□ -1
USP11-211ENST00000489111 GALK2Q01415 458 aa8.79□□□□□ -1
USP11-211ENST00000489111 DGUOKQ16854 277 aa8.79□□□□□ -1
USP11-211ENST00000489111 WDR38Q5JTN6 314 aa8.79□□□□□ -1
USP11-211ENST00000489111 HIST2H3PS2Q5TEC6 136 aa8.79□□□□□ -1
USP11-211ENST00000489111 RTL6Q6ICC9 239 aa8.79□□□□□ -1
USP11-211ENST00000489111 ANKRD16Q6P6B7 361 aa8.79□□□□□ -1
USP11-211ENST00000489111 C3P1Q6ZMU1 363 aa8.79□□□□□ -1
USP11-211ENST00000489111 ZNF704Q6ZNC4 412 aaPredicted RBP8.79□□□□□ -1
USP11-211ENST00000489111 HIST2H3AQ71DI3 136 aa8.79□□□□□ -1
USP11-211ENST00000489111 ZNF627Q7L945 461 aa8.79□□□□□ -1
USP11-211ENST00000489111 CEACAM19Q7Z692 300 aa8.79□□□□□ -1
USP11-211ENST00000489111 DPPA2Q7Z7J5 298 aa8.79□□□□□ -1
USP11-211ENST00000489111 SYT9Q86SS6 491 aa8.79□□□□□ -1
USP11-211ENST00000489111 CATSPERDQ86XM0 798 aa8.79□□□□□ -1
USP11-211ENST00000489111 SKA3Q8IX90 412 aa8.79□□□□□ -1
USP11-211ENST00000489111 PRSS35Q8N3Z0 413 aa8.79□□□□□ -1
USP11-211ENST00000489111 ZNF283Q8N7M2 679 aa8.79□□□□□ -1
USP11-211ENST00000489111 OR13C5Q8NGS8 318 aa8.79□□□□□ -1
USP11-211ENST00000489111 ABHD4Q8TB40 342 aa8.79□□□□□ -1
USP11-211ENST00000489111 RPS4Y2Q8TD47 263 aa8.79□□□□□ -1
USP11-211ENST00000489111 TSEN15Q8WW01 171 aaKnown RBP8.79□□□□□ -1
USP11-211ENST00000489111 NANOS1Q8WY41 292 aaKnown RBP8.79□□□□□ -1
USP11-211ENST00000489111 THRSPQ92748 146 aa8.79□□□□□ -1
USP11-211ENST00000489111 TRMT61AQ96FX7 289 aaKnown RBP8.79□□□□□ -1
USP11-211ENST00000489111 OR2H1Q9GZK4 316 aa8.79□□□□□ -1
USP11-211ENST00000489111 RNF167Q9H6Y7 350 aa8.79□□□□□ -1
USP11-211ENST00000489111 RNF121Q9H920 327 aa8.79□□□□□ -1
USP11-211ENST00000489111 PNRC2Q9NPJ4 139 aaKnown RBP8.79□□□□□ -1
USP11-211ENST00000489111 DDX28Q9NUL7 540 aaKnown RBP8.79□□□□□ -1
USP11-211ENST00000489111 CCDC59Q9P031 241 aaKnown RBP8.79□□□□□ -1
USP11-211ENST00000489111 OR52A1Q9UKL2 312 aa8.79□□□□□ -1
USP11-211ENST00000489111 SLC5A6Q9Y289 635 aa8.79□□□□□ -1
USP11-211ENST00000489111 PTPRQQ9UMZ3 2332 aa8.79□□□□□ -1
USP11-211ENST00000489111 DMXL2Q8TDJ6 3036 aa8.78□□□□□ -1
USP11-211ENST00000489111 OR4C45A6NMZ5 311 aa8.78□□□□□ -1
USP11-211ENST00000489111 GATBO75879 557 aaKnown RBP8.78□□□□□ -1
USP11-211ENST00000489111 ARL6IP5O75915 188 aa8.78□□□□□ -1
USP11-211ENST00000489111 ANXA2P07355 339 aaKnown RBP8.78□□□□□ -1
USP11-211ENST00000489111 ITGA5P08648 1049 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms