RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 JAZF1Q86VZ6 243 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 ZDHHC21Q8IVQ6 265 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 CLDND2Q8NHS1 167 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 TMEM158Q8WZ71 300 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 TIMD4Q96H15 378 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 ERMAPQ96PL5 475 aaPredicted RBP11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 EGLN1Q9GZT9 426 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 RACGAP1Q9H0H5 632 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 OR52D1Q9H346 318 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 MUC13Q9H3R2 512 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 NARFLQ9H6Q4 476 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 TBCCD1Q9NVR7 557 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 ASH2LQ9UBL3 628 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 ZDHHC8Q9ULC8 765 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 COA3Q9Y2R0 106 aaPredicted RBP11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 DNHD1Q96M86 4753 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 ERICH4A6NGS2 130 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 RNF212BA8MTL3 300 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 J3QW42 95 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 ARPC3O15145 178 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 TIMM8AO60220 97 aaPredicted RBP11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 CDC14BO60729 498 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 KRT36O76013 467 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 PPP1R3DO95685 299 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 RENP00797 406 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 SCG5P05408 212 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 ADH4P08319 380 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 NOS3P29474 1203 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 MSX2P35548 267 aaPredicted RBP11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 SLC3A1Q07837 685 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 TSTQ16762 297 aaKnown RBP11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 RPL13AP3Q6NVV1 102 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 IL17RELQ6ZVW7 336 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 PTCHD4Q6ZW05 846 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 USP51Q70EK9 711 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 ZNF771Q7L3S4 317 aaPredicted RBP11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 LINC00471Q8N535 108 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 RAB39BQ96DA2 213 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 DCLRE1CQ96SD1 692 aaKnown RBP11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 GPA33Q99795 319 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 NUAK2Q9H093 628 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 ACTR3BQ9P1U1 418 aa11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 TMEFF2Q9UIK5 374 aaPredicted RBP11.76□□□□□ -0.53
SPTLC1-207ENST00000488921 PHF1O43189 567 aaPredicted RBP11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 SPRY3O43610 288 aa11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 IDH3BO43837 385 aa11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 NGFP01138 241 aa11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 IGHV1-46P01743 117 aa11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 ANPEPP15144 967 aa11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 CDKN2AP42771 156 aaKnown RBP11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 CENPAP49450 140 aa11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 RGS6P49758 472 aa11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 TSPAN31Q12999 210 aa11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 KCNMB1Q16558 191 aa11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 C1orf94Q6P1W5 598 aa11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 LEG1Q6P5S2 330 aa11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 GJC3Q8NFK1 279 aa11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 OR52L1Q8NGH7 329 aa11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 OR51F2Q8NH61 342 aa11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 GNPDA2Q8TDQ7 276 aa11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 GTF3AQ92664 365 aaKnown RBP11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 RAB1CQ92928 201 aa11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 POP5Q969H6 163 aaKnown RBP11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 RAB3IPQ96QF0 476 aaPredicted RBP11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 IFT27Q9BW83 186 aa11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 CADM1Q9BY67 442 aaKnown RBP11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 HDHD2Q9H0R4 259 aa11.75□□□□□ -0.53
SPTLC1-207ENST00000488921 FBN1P35555 2871 aaKnown RBP11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 OR6C6A6NF89 314 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 ZSCAN5BA6NJL1 495 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 CIB2O75838 187 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 MSMBP08118 114 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 CD55P08174 381 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 GAAP10253 952 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 TNFSF4P23510 183 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 SRP14P37108 136 aaKnown RBP11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 GSSP48637 474 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 SLC36A3Q495N2 470 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 CYP2R1Q6VVX0 501 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 ZNF620Q6ZNG0 422 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 ASRGL1Q7L266 308 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 PEG10Q86TG7 708 aaKnown RBP11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 OR5L1Q8NGL2 311 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 OR1F12Q8NHA8 337 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 TMEM186Q96B77 213 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 LRGUKQ96M69 825 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 COQ7Q99807 217 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 TRIM15Q9C019 465 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 MAGIXQ9H6Y5 334 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 GRIP1Q9Y3R0 1128 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 ATRQ13535 2644 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 MXRA5Q9NR99 2828 aa11.74□□□□□ -0.53
SPTLC1-207ENST00000488921 IGLV1-36A0A0B4J1U3 117 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 TRAV20A0A0B4J274 112 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 TNFRSF11BO00300 401 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 MPZL1O95297 269 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 HIST1H1CP16403 213 aaKnown RBP11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 ATP6V1B2P21281 511 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 KITLGP21583 273 aa11.73□□□□□ -0.53
SPTLC1-207ENST00000488921 MAGEA2P43356 314 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms