RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 HKR1P10072 659 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 CTLA4P16410 223 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 ZNF26P17031 533 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-231ENST00000488905 SLC6A9P48067 706 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 ERFP50548 548 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 SF3A3Q12874 501 aaKnown RBP eCLIP15.5■□□□□ 0.072e-13■■□□□ 11.9
HDAC6-231ENST00000488905 FOXL1Q12952 345 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 KLF17Q5JT82 389 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-231ENST00000488905 CGB2Q6NT52 195 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 MBOAT2Q6ZWT7 520 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 FAM122BQ7Z309 247 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 LRRC28Q86X40 367 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-231ENST00000488905 RCN3Q96D15 328 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 CMBLQ96DG6 245 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 COG8Q96MW5 612 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 OR2V2Q96R30 315 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 NDEL1Q9GZM8 345 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 ZMAT3Q9HA38 289 aaKnown RBP15.5■□□□□ 0.07
HDAC6-231ENST00000488905 FGFR1OP2Q9NVK5 253 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 CMTM6Q9NX76 183 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 PLEK2Q9NYT0 353 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 GMPR2Q9P2T1 348 aaKnown RBP15.5■□□□□ 0.07
HDAC6-231ENST00000488905 ZNF69Q9UC07 566 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 STARD10Q9Y365 291 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 PCDHGB1Q9Y5G3 927 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 INSIG2Q9Y5U4 225 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 CAPN7Q9Y6W3 813 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 SURF4O15260 269 aa15.49■□□□□ 0.07
HDAC6-231ENST00000488905 ZNF682O95780 498 aa15.49■□□□□ 0.07
HDAC6-231ENST00000488905 PRTN3P24158 256 aa15.49■□□□□ 0.07
HDAC6-231ENST00000488905 MDH2P40926 338 aaKnown RBP15.49■□□□□ 0.07
HDAC6-231ENST00000488905 MMP16P51512 607 aa15.49■□□□□ 0.07
HDAC6-231ENST00000488905 GUCY1A3Q02108 690 aa15.49■□□□□ 0.07
HDAC6-231ENST00000488905 KRR1Q13601 381 aaKnown RBP15.49■□□□□ 0.07
HDAC6-231ENST00000488905 ZBED5Q49AG3 693 aa15.49■□□□□ 0.07
HDAC6-231ENST00000488905 IFI44LQ53G44 452 aa15.49■□□□□ 0.07
HDAC6-231ENST00000488905 ESCO2Q56NI9 601 aa15.49■□□□□ 0.07
HDAC6-231ENST00000488905 TBPL2Q6SJ96 375 aa15.49■□□□□ 0.07
HDAC6-231ENST00000488905 TMPRSS11FQ6ZWK6 438 aa15.49■□□□□ 0.07
HDAC6-231ENST00000488905 ARPINQ7Z6K5 226 aa15.49■□□□□ 0.07
HDAC6-231ENST00000488905 SLC7A6Q92536 515 aa15.49■□□□□ 0.07
HDAC6-231ENST00000488905 DUX5Q96PT3 197 aa15.49■□□□□ 0.07
HDAC6-231ENST00000488905 MRI1Q9BV20 369 aa15.49■□□□□ 0.07
HDAC6-231ENST00000488905 OR5V1Q9UGF6 321 aa15.49■□□□□ 0.07
HDAC6-231ENST00000488905 AP3M1Q9Y2T2 418 aa15.49■□□□□ 0.07
HDAC6-231ENST00000488905 OR6C6A6NF89 314 aa15.48■□□□□ 0.07
HDAC6-231ENST00000488905 J3QW42 95 aa15.48■□□□□ 0.07
HDAC6-231ENST00000488905 CXCR6O00574 342 aa15.48■□□□□ 0.07
HDAC6-231ENST00000488905 OTPQ5XKR4 325 aa15.48■□□□□ 0.07
HDAC6-231ENST00000488905 C1orf94Q6P1W5 598 aa15.48■□□□□ 0.07
HDAC6-231ENST00000488905 CBLL1Q75N03 491 aa15.48■□□□□ 0.07
HDAC6-231ENST00000488905 MUC20Q8N307 709 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-231ENST00000488905 RASD2Q96D21 266 aa15.48■□□□□ 0.07
HDAC6-231ENST00000488905 HAVCR1Q96D42 359 aa15.48■□□□□ 0.07
HDAC6-231ENST00000488905 HSH2DQ96JZ2 352 aa15.48■□□□□ 0.07
HDAC6-231ENST00000488905 C1orf147Q96MC9 270 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-231ENST00000488905 GPA33Q99795 319 aa15.48■□□□□ 0.07
HDAC6-231ENST00000488905 ZNF747Q9BV97 191 aa15.48■□□□□ 0.07
HDAC6-231ENST00000488905 SYT4Q9H2B2 425 aa15.48■□□□□ 0.07
HDAC6-231ENST00000488905 GCM1Q9NP62 436 aa15.48■□□□□ 0.07
HDAC6-231ENST00000488905 ASH2LQ9UBL3 628 aa15.48■□□□□ 0.07
HDAC6-231ENST00000488905 ATPIF1Q9UII2 106 aa15.48■□□□□ 0.07
HDAC6-231ENST00000488905 TMEM5Q9Y2B1 443 aa15.48■□□□□ 0.07
HDAC6-231ENST00000488905 LRCH1Q9Y2L9 728 aa15.48■□□□□ 0.07
HDAC6-231ENST00000488905 CEACAM18A8MTB9 384 aa15.47■□□□□ 0.07
HDAC6-231ENST00000488905 TMEM178BH3BS89 294 aa15.47■□□□□ 0.07
HDAC6-231ENST00000488905 TMPRSS2O15393 492 aa15.47■□□□□ 0.07
HDAC6-231ENST00000488905 RAC2P15153 192 aa15.47■□□□□ 0.07
HDAC6-231ENST00000488905 SDHAP31040 664 aa15.47■□□□□ 0.07
HDAC6-231ENST00000488905 RGS6P49758 472 aa15.47■□□□□ 0.07
HDAC6-231ENST00000488905 LSM6P62312 80 aaKnown RBP15.47■□□□□ 0.07
HDAC6-231ENST00000488905 PRR31Q5SQ13 230 aa15.47■□□□□ 0.07
HDAC6-231ENST00000488905 SHISA2Q6UWI4 295 aa15.47■□□□□ 0.07
HDAC6-231ENST00000488905 OR5AS1Q8N127 324 aa15.47■□□□□ 0.07
HDAC6-231ENST00000488905 BCL6BQ8N143 479 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-231ENST00000488905 POU5F2Q8N7G0 328 aa15.47■□□□□ 0.07
HDAC6-231ENST00000488905 OR10AD1Q8NGE0 317 aa15.47■□□□□ 0.07
HDAC6-231ENST00000488905 PTP4A1Q93096 173 aa15.47■□□□□ 0.07
HDAC6-231ENST00000488905 FAM46AQ96IP4 442 aaKnown RBP15.47■□□□□ 0.07
HDAC6-231ENST00000488905 ZNF48Q96MX3 618 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-231ENST00000488905 C1QTNF5Q9BXJ0 243 aa15.47■□□□□ 0.07
HDAC6-231ENST00000488905 ANKRD19PQ9H560 264 aa15.47■□□□□ 0.07
HDAC6-231ENST00000488905 ARGLU1Q9NWB6 273 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-231ENST00000488905 IFNL4K9M1U5 179 aa15.46■□□□□ 0.07
HDAC6-231ENST00000488905 SLC22A2O15244 555 aa15.46■□□□□ 0.07
HDAC6-231ENST00000488905 SLC16A7O60669 478 aa15.46■□□□□ 0.07
HDAC6-231ENST00000488905 DBHP09172 617 aa15.46■□□□□ 0.07
HDAC6-231ENST00000488905 LIPEQ05469 1076 aa15.46■□□□□ 0.07
HDAC6-231ENST00000488905 CCDC92Q53HC0 331 aaPredicted RBP15.46■□□□□ 0.07
HDAC6-231ENST00000488905 FBXW12Q6X9E4 464 aa15.46■□□□□ 0.07
HDAC6-231ENST00000488905 FKBP9P1Q75LS8 142 aa15.46■□□□□ 0.07
HDAC6-231ENST00000488905 RRM2BQ7LG56 351 aa15.46■□□□□ 0.07
HDAC6-231ENST00000488905 CYP4Z1Q86W10 505 aa15.46■□□□□ 0.07
HDAC6-231ENST00000488905 GLB1L2Q8IW92 636 aa15.46■□□□□ 0.07
HDAC6-231ENST00000488905 SLC15A3Q8IY34 581 aa15.46■□□□□ 0.07
HDAC6-231ENST00000488905 OR1F12Q8NHA8 337 aa15.46■□□□□ 0.07
HDAC6-231ENST00000488905 SLC7A13Q8TCU3 470 aa15.46■□□□□ 0.07
HDAC6-231ENST00000488905 GPX7Q96SL4 187 aaPredicted RBP15.46■□□□□ 0.07
HDAC6-231ENST00000488905 RERGLQ9H628 205 aa15.46■□□□□ 0.07
HDAC6-231ENST00000488905 NMNAT1Q9HAN9 279 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms