RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 CLEC18BQ6UXF7 455 aa10.72□□□□□ -0.69
TRAIP-209ENST00000488860 LRRN1Q6UXK5 716 aa10.72□□□□□ -0.69
TRAIP-209ENST00000488860 MEX3BQ6ZN04 569 aaKnown RBP10.72□□□□□ -0.69
TRAIP-209ENST00000488860 ALDH16A1Q8IZ83 802 aa10.72□□□□□ -0.69
TRAIP-209ENST00000488860 ACBD7Q8N6N7 88 aa10.72□□□□□ -0.69
TRAIP-209ENST00000488860 CLEC18CQ8NCF0 446 aa10.72□□□□□ -0.69
TRAIP-209ENST00000488860 OR10S1Q8NGN2 331 aa10.72□□□□□ -0.69
TRAIP-209ENST00000488860 SNX33Q8WV41 574 aa10.72□□□□□ -0.69
TRAIP-209ENST00000488860 MYDGFQ969H8 173 aa10.72□□□□□ -0.69
TRAIP-209ENST00000488860 TMEM80Q96HE8 168 aa10.72□□□□□ -0.69
TRAIP-209ENST00000488860 MNTQ99583 582 aa10.72□□□□□ -0.69
TRAIP-209ENST00000488860 ATF6BQ99941 703 aa10.72□□□□□ -0.69
TRAIP-209ENST00000488860 ALG8Q9BVK2 526 aa10.72□□□□□ -0.69
TRAIP-209ENST00000488860 HDHD2Q9H0R4 259 aa10.72□□□□□ -0.69
TRAIP-209ENST00000488860 FGF20Q9NP95 211 aaPredicted RBP10.72□□□□□ -0.69
TRAIP-209ENST00000488860 MRPS18AQ9NVS2 196 aaKnown RBP10.72□□□□□ -0.69
TRAIP-209ENST00000488860 NPAP1Q9NZP6 1156 aa10.72□□□□□ -0.69
TRAIP-209ENST00000488860 ERVK-18Q9QC07 812 aa10.72□□□□□ -0.69
TRAIP-209ENST00000488860 KLF2Q9Y5W3 355 aaPredicted RBP10.72□□□□□ -0.69
TRAIP-209ENST00000488860 USP9XQ93008 2570 aaPredicted RBP10.72□□□□□ -0.69
TRAIP-209ENST00000488860 TENM4Q6N022 2769 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 IGHV1-18A0A0C4DH31 117 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 PRR32B1ATL7 298 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 J3QRE1 110 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 CASKO14936 926 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 MAGEB4O15481 346 aaPredicted RBP10.71□□□□□ -0.69
TRAIP-209ENST00000488860 SYNGR3O43761 229 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 CLDN1O95832 211 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 IGHA1P01876 353 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 CDK1P06493 297 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 ADRA2AP08913 450 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 CECR9P0C854 216 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 CCL2P13500 99 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 ZNF14P17017 642 aaPredicted RBP10.71□□□□□ -0.69
TRAIP-209ENST00000488860 ALOX5APP20292 161 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 STOMP27105 288 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 CHN2P52757 468 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 GABARAPL2P60520 117 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 HIST1H3AP68431 136 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 MVKQ03426 396 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 TBC1D28Q2M2D7 210 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 HIST2H3PS2Q5TEC6 136 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 KCTD18Q6PI47 426 aaPredicted RBP10.71□□□□□ -0.69
TRAIP-209ENST00000488860 HIST2H3AQ71DI3 136 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 FAM220AQ7Z4H9 259 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 LHFPL3Q86UP9 236 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.71□□□□□ -0.69
TRAIP-209ENST00000488860 ZNF584Q8IVC4 421 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 CPEB3Q8NE35 698 aaKnown RBP10.71□□□□□ -0.69
TRAIP-209ENST00000488860 SLC30A7Q8NEW0 376 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 OR1F12Q8NHA8 337 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 IPCEF1Q8WWN9 437 aaPredicted RBP10.71□□□□□ -0.69
TRAIP-209ENST00000488860 ASB17Q8WXJ9 295 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 SLC7A6Q92536 515 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 MRPL48Q96GC5 212 aaKnown RBP10.71□□□□□ -0.69
TRAIP-209ENST00000488860 OR8B4Q96RC9 309 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 KCNS3Q9BQ31 491 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 CDH20Q9HBT6 801 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 MOV10Q9HCE1 1003 aaKnown RBP10.71□□□□□ -0.69
TRAIP-209ENST00000488860 PNRC2Q9NPJ4 139 aaKnown RBP10.71□□□□□ -0.69
TRAIP-209ENST00000488860 INPP5EQ9NRR6 644 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 FKBP14Q9NWM8 211 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 CHCHD3Q9NX63 227 aaKnown RBP10.71□□□□□ -0.69
TRAIP-209ENST00000488860 SLCO1C1Q9NYB5 712 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 CRIM1Q9NZV1 1036 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 GNG8Q9UK08 70 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 FBXL3Q9UKT7 428 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 DIMT1Q9UNQ2 313 aaKnown RBP10.71□□□□□ -0.69
TRAIP-209ENST00000488860 EXOSC1Q9Y3B2 195 aaKnown RBP10.71□□□□□ -0.69
TRAIP-209ENST00000488860 LRP12Q9Y561 859 aa10.71□□□□□ -0.69
TRAIP-209ENST00000488860 DOPEY1Q5JWR5 2465 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 ADGRG4Q8IZF6 3080 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 C5orf49A4QMS7 147 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 OR6C6A6NF89 314 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 MYL12BO14950 172 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 RGS10O43665 173 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 PTHP01270 115 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 IGKV3-15P01624 115 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 MT-ND2P03891 347 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 SERPINA5P05154 406 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 KRT8P05787 483 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 DBHP09172 617 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 DCKP27707 260 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 PEX19P40855 299 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 GDI2P50395 445 aaKnown RBP10.7□□□□□ -0.7
TRAIP-209ENST00000488860 ETV1P50549 477 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 ACTA2P62736 377 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 GRB2P62993 217 aaKnown RBP10.7□□□□□ -0.7
TRAIP-209ENST00000488860 ACTG2P63267 376 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 SLC35A2P78381 396 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 GALK2Q01415 458 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 TP53I3Q53FA7 332 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 SEZ6L2Q6UXD5 910 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 PLEKHG7Q6ZR37 379 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 SSX8Q7RTT4 187 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 ZNF283Q8N7M2 679 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 YIPF7Q8N8F6 280 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 RNF133Q8WVZ7 376 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 ZNF75AQ96N20 296 aa10.7□□□□□ -0.7
TRAIP-209ENST00000488860 DACH2Q96NX9 599 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms