RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 RER1O15258 196 aa15.12■□□□□ 0.01
ITGB1-215ENST00000488494 PPIHO43447 177 aaKnown RBP15.12■□□□□ 0.01
ITGB1-215ENST00000488494 SPRY3O43610 288 aa15.12■□□□□ 0.01
ITGB1-215ENST00000488494 FAM157CP0CG43 387 aa15.12■□□□□ 0.01
ITGB1-215ENST00000488494 MMP15P51511 669 aa15.12■□□□□ 0.01
ITGB1-215ENST00000488494 MS4A2Q01362 244 aa15.12■□□□□ 0.01
ITGB1-215ENST00000488494 TRIM25Q14258 630 aaKnown RBP15.12■□□□□ 0.01
ITGB1-215ENST00000488494 KCNMB1Q16558 191 aa15.12■□□□□ 0.01
ITGB1-215ENST00000488494 OR6V1Q8N148 313 aa15.12■□□□□ 0.01
ITGB1-215ENST00000488494 NPEPL1Q8NDH3 523 aa15.12■□□□□ 0.01
ITGB1-215ENST00000488494 OR52L1Q8NGH7 329 aa15.12■□□□□ 0.01
ITGB1-215ENST00000488494 CLPTM1LQ96KA5 538 aa15.12■□□□□ 0.01
ITGB1-215ENST00000488494 BEX2Q9BXY8 128 aa15.12■□□□□ 0.01
ITGB1-215ENST00000488494 RACGAP1Q9H0H5 632 aa15.12■□□□□ 0.01
ITGB1-215ENST00000488494 POFUT1Q9H488 388 aa15.12■□□□□ 0.01
ITGB1-215ENST00000488494 SAP30LQ9HAJ7 183 aa15.12■□□□□ 0.01
ITGB1-215ENST00000488494 DECR2Q9NUI1 292 aa15.12■□□□□ 0.01
ITGB1-215ENST00000488494 VNN3Q9NY84 501 aa15.12■□□□□ 0.01
ITGB1-215ENST00000488494 LHFPL6Q9Y693 200 aa15.12■□□□□ 0.01
ITGB1-215ENST00000488494 CUBNO60494 3623 aa15.12■□□□□ 0.01
ITGB1-215ENST00000488494 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.11■□□□□ 0.011e-6■■□□□ 14.5
ITGB1-215ENST00000488494 IGHV1-69-2A0A0G2JMI3 117 aa15.11■□□□□ 0.01
ITGB1-215ENST00000488494 TIMM8AO60220 97 aaPredicted RBP15.11■□□□□ 0.01
ITGB1-215ENST00000488494 CCNB2O95067 398 aa15.11■□□□□ 0.01
ITGB1-215ENST00000488494 IGHV1-46P01743 117 aa15.11■□□□□ 0.01
ITGB1-215ENST00000488494 GSTM3P21266 225 aa15.11■□□□□ 0.01
ITGB1-215ENST00000488494 PPP1R8Q12972 351 aaKnown RBP15.11■□□□□ 0.01
ITGB1-215ENST00000488494 FAM98BQ52LJ0 330 aaKnown RBP15.11■□□□□ 0.01
ITGB1-215ENST00000488494 CCDC92Q53HC0 331 aaPredicted RBP15.11■□□□□ 0.01
ITGB1-215ENST00000488494 FAM120AOSQ5T036 256 aa15.11■□□□□ 0.01
ITGB1-215ENST00000488494 SLC35F1Q5T1Q4 408 aa15.11■□□□□ 0.01
ITGB1-215ENST00000488494 ZNF770Q6IQ21 691 aaPredicted RBP15.11■□□□□ 0.01
ITGB1-215ENST00000488494 PGM2L1Q6PCE3 622 aa15.11■□□□□ 0.01
ITGB1-215ENST00000488494 USP51Q70EK9 711 aa15.11■□□□□ 0.01
ITGB1-215ENST00000488494 AQP11Q8NBQ7 271 aa15.11■□□□□ 0.01
ITGB1-215ENST00000488494 SLC26A10Q8NG04 563 aa15.11■□□□□ 0.01
ITGB1-215ENST00000488494 OR1F12Q8NHA8 337 aa15.11■□□□□ 0.01
ITGB1-215ENST00000488494 CLDND2Q8NHS1 167 aa15.11■□□□□ 0.01
ITGB1-215ENST00000488494 ASB9Q96DX5 294 aa15.11■□□□□ 0.01
ITGB1-215ENST00000488494 TRIM15Q9C019 465 aa15.11■□□□□ 0.01
ITGB1-215ENST00000488494 B9D1Q9UPM9 204 aa15.11■□□□□ 0.01
ITGB1-215ENST00000488494 GRIP1Q9Y3R0 1128 aa15.11■□□□□ 0.01
ITGB1-215ENST00000488494 WNT9BO14905 357 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 IDH3BO43837 385 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 IFNA2P01563 188 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 DBHP09172 617 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 HMGA2P52926 109 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 CDH15P55291 814 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.1■□□□□ 0.01
ITGB1-215ENST00000488494 ZMAT1Q5H9K5 638 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 FAM209AQ5JX71 171 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 AVPI1Q5T686 147 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 RPL13AP3Q6NVV1 102 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 CORO6Q6QEF8 472 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 LINC00471Q8N535 108 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 LINC01356Q8N9X3 169 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 OR52E2Q8NGJ4 325 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 OR8D4Q8NGM9 314 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 LRGUKQ96M69 825 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 MDFIQ99750 246 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 PLA2G12AQ9BZM1 189 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 MSL2Q9HCI7 577 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 SRA1Q9HD15 236 aaKnown RBP15.1■□□□□ 0.01
ITGB1-215ENST00000488494 CYSLTR2Q9NS75 346 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 TBC1D23Q9NUY8 699 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 TBCCD1Q9NVR7 557 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 CGGBP1Q9UFW8 167 aaPredicted RBP15.1■□□□□ 0.01
ITGB1-215ENST00000488494 ATPIF1Q9UII2 106 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 SAMHD1Q9Y3Z3 626 aaKnown RBP15.1■□□□□ 0.01
ITGB1-215ENST00000488494 CACNG2Q9Y698 323 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 U3KQV3 271 aa15.1■□□□□ 0.01
ITGB1-215ENST00000488494 MALRD1Q5VYJ5 2156 aa15.09■□□□□ 0.01
ITGB1-215ENST00000488494 OR6C68A6NDL8 312 aa15.09■□□□□ 0.01
ITGB1-215ENST00000488494 HNF1AP20823 631 aa15.09■□□□□ 0.01
ITGB1-215ENST00000488494 TMEM33P57088 247 aa15.09■□□□□ 0.01
ITGB1-215ENST00000488494 TEKQ02763 1124 aa15.09■□□□□ 0.01
ITGB1-215ENST00000488494 PSG7Q13046 419 aa15.09■□□□□ 0.01
ITGB1-215ENST00000488494 OR2T5Q6IEZ7 315 aa15.09■□□□□ 0.01
ITGB1-215ENST00000488494 CFAP77Q6ZQR2 320 aa15.09■□□□□ 0.01
ITGB1-215ENST00000488494 LINC00346Q8IVM7 164 aa15.09■□□□□ 0.01
ITGB1-215ENST00000488494 OR2T29Q8NH02 315 aa15.09■□□□□ 0.01
ITGB1-215ENST00000488494 HDHD2Q9H0R4 259 aa15.09■□□□□ 0.01
ITGB1-215ENST00000488494 REEP1Q9H902 201 aa15.09■□□□□ 0.01
ITGB1-215ENST00000488494 TAS2R1Q9NYW7 299 aa15.09■□□□□ 0.01
ITGB1-215ENST00000488494 BHLHE40O14503 412 aa15.08■□□□□ 0
ITGB1-215ENST00000488494 SOX14O95416 240 aa15.08■□□□□ 0
ITGB1-215ENST00000488494 GASTP01350 101 aa15.08■□□□□ 0
ITGB1-215ENST00000488494 TFP02787 698 aa15.08■□□□□ 0
ITGB1-215ENST00000488494 SRD5A1P18405 259 aa15.08■□□□□ 0
ITGB1-215ENST00000488494 CRYBB2P43320 205 aa15.08■□□□□ 0
ITGB1-215ENST00000488494 HIST1H3AP68431 136 aa15.08■□□□□ 0
ITGB1-215ENST00000488494 MVKQ03426 396 aa15.08■□□□□ 0
ITGB1-215ENST00000488494 COX10Q12887 443 aa15.08■□□□□ 0
ITGB1-215ENST00000488494 CR1LQ2VPA4 569 aa15.08■□□□□ 0
ITGB1-215ENST00000488494 HIST2H3PS2Q5TEC6 136 aa15.08■□□□□ 0
ITGB1-215ENST00000488494 RASSF6Q6ZTQ3 369 aa15.08■□□□□ 0
ITGB1-215ENST00000488494 HIST2H3AQ71DI3 136 aa15.08■□□□□ 0
ITGB1-215ENST00000488494 TRPM8Q7Z2W7 1104 aa15.08■□□□□ 0
ITGB1-215ENST00000488494 ZBTB46Q86UZ6 589 aa15.08■□□□□ 0
ITGB1-215ENST00000488494 CYB561A3Q8NBI2 242 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms