RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 POLR3KQ9Y2Y1 108 aaPredicted RBP12.92□□□□□ -0.34
TRIM50-203ENST00000488217 CAPN7Q9Y6W3 813 aa12.92□□□□□ -0.34
TRIM50-203ENST00000488217 TENM1Q9UKZ4 2725 aa12.91□□□□□ -0.34
TRIM50-203ENST00000488217 SURF4O15260 269 aa12.91□□□□□ -0.34
TRIM50-203ENST00000488217 RBMXP38159 391 aaKnown RBP12.91□□□□□ -0.34
TRIM50-203ENST00000488217 GPR4P46093 362 aa12.91□□□□□ -0.34
TRIM50-203ENST00000488217 HTR5AP47898 357 aa12.91□□□□□ -0.34
TRIM50-203ENST00000488217 LSM6P62312 80 aaKnown RBP12.91□□□□□ -0.34
TRIM50-203ENST00000488217 HNRNPA0Q13151 305 aaKnown RBP12.91□□□□□ -0.34
TRIM50-203ENST00000488217 TMEM155Q4W5P6 130 aa12.91□□□□□ -0.34
TRIM50-203ENST00000488217 Q6ZR03 302 aa12.91□□□□□ -0.34
TRIM50-203ENST00000488217 VASH1Q7L8A9 365 aaPredicted RBP12.91□□□□□ -0.34
TRIM50-203ENST00000488217 FAM122BQ7Z309 247 aa12.91□□□□□ -0.34
TRIM50-203ENST00000488217 ARPINQ7Z6K5 226 aa12.91□□□□□ -0.34
TRIM50-203ENST00000488217 GLB1L2Q8IW92 636 aa12.91□□□□□ -0.34
TRIM50-203ENST00000488217 POU5F2Q8N7G0 328 aa12.91□□□□□ -0.34
TRIM50-203ENST00000488217 DEFB108BQ8NET1 73 aa12.91□□□□□ -0.34
TRIM50-203ENST00000488217 POP5Q969H6 163 aaKnown RBP12.91□□□□□ -0.34
TRIM50-203ENST00000488217 PLEK2Q9NYT0 353 aa12.91□□□□□ -0.34
TRIM50-203ENST00000488217 ARMCX1Q9P291 453 aa12.91□□□□□ -0.34
TRIM50-203ENST00000488217 PPP1R3CQ9UQK1 317 aa12.91□□□□□ -0.34
TRIM50-203ENST00000488217 COA3Q9Y2R0 106 aaPredicted RBP12.91□□□□□ -0.34
TRIM50-203ENST00000488217 AUP1Q9Y679 476 aa12.91□□□□□ -0.34
TRIM50-203ENST00000488217 TEX13CA0A0J9YWL9 993 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 DOK2O60496 412 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 SLC16A7O60669 478 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 KHDRBS3O75525 346 aaKnown RBP12.9□□□□□ -0.34
TRIM50-203ENST00000488217 RAC2P15153 192 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 CTLA4P16410 223 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 BTG1P62324 171 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 UBA52P62987 128 aaKnown RBP12.9□□□□□ -0.34
TRIM50-203ENST00000488217 GNGT1P63211 74 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 ZNF154Q13106 437 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 MESTQ5EB52 335 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 GPR139Q6DWJ6 353 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 SLC27A4Q6P1M0 643 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 C1orf94Q6P1W5 598 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 CYP4Z1Q86W10 505 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 ATG16L2Q8NAA4 619 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 OR5L1Q8NGL2 311 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 OR1F12Q8NHA8 337 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 SLC7A6Q92536 515 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 ZNF570Q96NI8 536 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 NDEL1Q9GZM8 345 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 ANKRD19PQ9H560 264 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 RERGLQ9H628 205 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 EFCAB1Q9HAE3 211 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 NUP50Q9UKX7 468 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 ENPP4Q9Y6X5 453 aa12.9□□□□□ -0.34
TRIM50-203ENST00000488217 TMEM178BH3BS89 294 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 NDUFB2O95178 105 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 SERPINA1P01009 418 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 COX4I1P13073 169 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 AQP6Q13520 282 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 ZMYND11Q15326 602 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 TUSC1Q2TAM9 212 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 CCDC92Q53HC0 331 aaPredicted RBP12.89□□□□□ -0.35
TRIM50-203ENST00000488217 AWAT1Q58HT5 328 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 OTPQ5XKR4 325 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 TSEN54Q7Z6J9 526 aaKnown RBP12.89□□□□□ -0.35
TRIM50-203ENST00000488217 SIGLECL1Q8N7X8 197 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 SLC7A13Q8TCU3 470 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 ITLN1Q8WWA0 313 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 HSH2DQ96JZ2 352 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 OR2V2Q96R30 315 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 SIGLEC11Q96RL6 698 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 GPA33Q99795 319 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 SYT4Q9H2B2 425 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 GCM1Q9NP62 436 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 NRIP3Q9NQ35 241 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 VSX1Q9NZR4 365 aaPredicted RBP12.89□□□□□ -0.35
TRIM50-203ENST00000488217 ASH2LQ9UBL3 628 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 TMEM5Q9Y2B1 443 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 FAM32AQ9Y421 112 aaKnown RBP12.89□□□□□ -0.35
TRIM50-203ENST00000488217 PPIAL4AQ9Y536 164 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 INSIG2Q9Y5U4 225 aa12.89□□□□□ -0.35
TRIM50-203ENST00000488217 A0A1W2PRQ8 180 aa12.88□□□□□ -0.35
TRIM50-203ENST00000488217 OR6C6A6NF89 314 aa12.88□□□□□ -0.35
TRIM50-203ENST00000488217 NME4O00746 187 aa12.88□□□□□ -0.35
TRIM50-203ENST00000488217 NDUFAB1O14561 156 aa12.88□□□□□ -0.35
TRIM50-203ENST00000488217 H1F0P07305 194 aaKnown RBP12.88□□□□□ -0.35
TRIM50-203ENST00000488217 WNT2P09544 360 aa12.88□□□□□ -0.35
TRIM50-203ENST00000488217 ZNF12P17014 697 aa12.88□□□□□ -0.35
TRIM50-203ENST00000488217 CPT2P23786 658 aa12.88□□□□□ -0.35
TRIM50-203ENST00000488217 SDHAP31040 664 aa12.88□□□□□ -0.35
TRIM50-203ENST00000488217 MDH2P40926 338 aaKnown RBP12.88□□□□□ -0.35
TRIM50-203ENST00000488217 SLC7A2P52569 658 aa12.88□□□□□ -0.35
TRIM50-203ENST00000488217 PAX8Q06710 450 aa12.88□□□□□ -0.35
TRIM50-203ENST00000488217 FOXL1Q12952 345 aa12.88□□□□□ -0.35
TRIM50-203ENST00000488217 DGCR6Q14129 220 aa12.88□□□□□ -0.35
TRIM50-203ENST00000488217 HLXQ14774 488 aaPredicted RBP12.88□□□□□ -0.35
TRIM50-203ENST00000488217 KCNMB1Q16558 191 aa12.88□□□□□ -0.35
TRIM50-203ENST00000488217 OR13G1Q8NGZ3 307 aa12.88□□□□□ -0.35
TRIM50-203ENST00000488217 RASD2Q96D21 266 aa12.88□□□□□ -0.35
TRIM50-203ENST00000488217 FAM46AQ96IP4 442 aaKnown RBP12.88□□□□□ -0.35
TRIM50-203ENST00000488217 NUAK2Q9H093 628 aa12.88□□□□□ -0.35
TRIM50-203ENST00000488217 TMEM165Q9HC07 324 aa12.88□□□□□ -0.35
TRIM50-203ENST00000488217 ZNF69Q9UC07 566 aa12.88□□□□□ -0.35
TRIM50-203ENST00000488217 SIGLEC7Q9Y286 467 aa12.88□□□□□ -0.35
TRIM50-203ENST00000488217 IER3IP1Q9Y5U9 82 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms