RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 GPR18Q14330 331 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 TMEM225Q6GV28 225 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 FIGLAQ6QHK4 219 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 PHYHIPLQ96FC7 376 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 TSPAN32Q96QS1 320 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 INTS14Q96SY0 518 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 PHB2Q99623 299 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 TMEM106CQ9BVX2 250 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 ACKR4Q9NPB9 350 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 GHRLQ9UBU3 117 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 MRPS33Q9Y291 106 aaKnown RBP12.76□□□□□ -0.37
COL16A1-214ENST00000488128 RP1P56715 2156 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 POM121BA6NF01 834 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 STK17BO94768 372 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 NKX2-2O95096 273 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 MPZL1O95297 269 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 SFTA3P0C7M3 94 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 RCC1P18754 421 aaPredicted RBP12.76□□□□□ -0.37
COL16A1-214ENST00000488128 CPT2P23786 658 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 PSMB6P28072 239 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 S100A12P80511 92 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 ZNHIT3Q15649 155 aaPredicted RBP12.76□□□□□ -0.37
COL16A1-214ENST00000488128 NPSR1Q6W5P4 371 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 TRAPPC6BQ86SZ2 158 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 FJX1Q86VR8 437 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 METTL27Q8N6F8 245 aaPredicted RBP12.76□□□□□ -0.37
COL16A1-214ENST00000488128 TMEM229BQ8NBD8 167 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 MARCH1Q8TCQ1 289 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 RNF141Q8WVD5 230 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 SLC25A36Q96CQ1 311 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 PCNX3Q9H6A9 2034 aa12.76□□□□□ -0.37
COL16A1-214ENST00000488128 COLCA2A8K830 154 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 WISP1O95388 367 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 NR0B1P51843 470 aaKnown RBP12.75□□□□□ -0.37
COL16A1-214ENST00000488128 PRPS1P60891 318 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 FABP9Q0Z7S8 132 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 KRBOX4Q5JUW0 171 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 AKR1E2Q96JD6 320 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 NRIP2Q9BQI9 281 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 SLC17A9Q9BYT1 436 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.75□□□□□ -0.37
COL16A1-214ENST00000488128 GSKIPQ9P0R6 139 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 PCDHGA1Q9Y5H4 931 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 WIPF3A6NGB9 483 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 METTL12A8MUP2 240 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 GNB3P16520 340 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 EN2P19622 333 aaPredicted RBP12.75□□□□□ -0.37
COL16A1-214ENST00000488128 IGFALSP35858 605 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 ACTR1BP42025 376 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 OR2B8PP59922 312 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 ACTR1AP61163 376 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 CD226Q15762 336 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 EIF2S3LQ2VIR3 472 aaKnown RBP12.75□□□□□ -0.37
COL16A1-214ENST00000488128 FBXO46Q6PJ61 603 aaPredicted RBP12.75□□□□□ -0.37
COL16A1-214ENST00000488128 PARM1Q6UWI2 310 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 ABHD13Q7L211 337 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 ZNF550Q7Z398 422 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 PAQR4Q8N4S7 273 aaPredicted RBP12.75□□□□□ -0.37
COL16A1-214ENST00000488128 OR4D6Q8NGJ1 314 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 OR51F2Q8NH61 342 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 ZNF563Q8TA94 476 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 RERGQ96A58 199 aaPredicted RBP12.75□□□□□ -0.37
COL16A1-214ENST00000488128 ANKRD9Q96BM1 317 aaPredicted RBP12.75□□□□□ -0.37
COL16A1-214ENST00000488128 SPACA5Q96QH8 159 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 RPS10P5Q9NQ39 176 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 OR5AC2Q9NZP5 309 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 FBXL21Q9UKT6 434 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 COLEC10Q9Y6Z7 277 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 A0A087WV62 115 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 K7EQS6 105 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 FGF16O43320 207 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 CD74P04233 296 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 APODP05090 189 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 HOXB1P14653 301 aaPredicted RBP12.75□□□□□ -0.37
COL16A1-214ENST00000488128 ZNF44P15621 663 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 C5AR1P21730 350 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 RAB5BP61020 215 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 ZNF74Q16587 644 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 MST1LQ2TV78 715 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 KDM8Q8N371 416 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 OR2I1PQ8NGU4 316 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 PHOSPHO2Q8TCD6 241 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 FGF14Q92915 247 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 TCEAL3Q969E4 200 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 RBM18Q96H35 190 aaKnown RBP12.75□□□□□ -0.37
COL16A1-214ENST00000488128 RNF126Q9BV68 326 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 EPHA6Q9UF33 1036 aa12.75□□□□□ -0.37
COL16A1-214ENST00000488128 CARHSP1Q9Y2V2 147 aaKnown RBP12.75□□□□□ -0.37
COL16A1-214ENST00000488128 MUC22E2RYF6 1773 aaPredicted RBP12.74□□□□□ -0.37
COL16A1-214ENST00000488128 LOC101059948A0A1B0GTJ6 334 aa12.74□□□□□ -0.37
COL16A1-214ENST00000488128 LRP3O75074 770 aa12.74□□□□□ -0.37
COL16A1-214ENST00000488128 CRHP06850 196 aa12.74□□□□□ -0.37
COL16A1-214ENST00000488128 ABCD3P28288 659 aa12.74□□□□□ -0.37
COL16A1-214ENST00000488128 RPS4XP62701 263 aaKnown RBP12.74□□□□□ -0.37
COL16A1-214ENST00000488128 EBPQ15125 230 aaKnown RBP12.74□□□□□ -0.37
COL16A1-214ENST00000488128 FRMD1Q8N878 549 aa12.74□□□□□ -0.37
COL16A1-214ENST00000488128 EXD3Q8N9H8 876 aa12.74□□□□□ -0.37
COL16A1-214ENST00000488128 ASB5Q8WWX0 329 aa12.74□□□□□ -0.37
COL16A1-214ENST00000488128 FN3KRPQ9HA64 309 aa12.74□□□□□ -0.37
COL16A1-214ENST00000488128 GDE1Q9NZC3 331 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms