RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 ABCA1O95477 2261 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 NSD1Q96L73 2696 aaPredicted RBP11.3□□□□□ -0.6
SF1-216ENST00000486867 C5orf49A4QMS7 147 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 ZAR1LA6NP61 321 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 E9PQ18 207 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 RER1O15258 196 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 IGHV3-13P01766 116 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 PSKH1P11801 424 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 FOSL1P15407 271 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 SLC2A5P22732 501 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 OTX1P32242 354 aaPredicted RBP11.3□□□□□ -0.6
SF1-216ENST00000486867 PTGES3Q15185 160 aaKnown RBP11.3□□□□□ -0.6
SF1-216ENST00000486867 ELFN2Q5R3F8 820 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 MBNL2Q5VZF2 373 aaKnown RBP11.3□□□□□ -0.6
SF1-216ENST00000486867 OTPQ5XKR4 325 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 RGS7BPQ6MZT1 257 aaPredicted RBP11.3□□□□□ -0.6
SF1-216ENST00000486867 VHLLQ6RSH7 139 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 UNQ6126/PRO20091Q6UXV3 157 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 CFAP77Q6ZQR2 320 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 COLCA1Q6ZS62 124 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 RFPL4BQ6ZWI9 263 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 PROKR2Q8NFJ6 384 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 OR9Q1Q8NGQ5 310 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 OR1F12Q8NHA8 337 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 MARS2Q96GW9 593 aaKnown RBP11.3□□□□□ -0.6
SF1-216ENST00000486867 PKP2Q99959 881 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 GABARAPL3Q9BY60 117 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 ELOVL3Q9HB03 270 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 HINT3Q9NQE9 182 aaKnown RBP11.3□□□□□ -0.6
SF1-216ENST00000486867 KRT84Q9NSB2 600 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 DDX28Q9NUL7 540 aaKnown RBP11.3□□□□□ -0.6
SF1-216ENST00000486867 KIF17Q9P2E2 1029 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 ENOPH1Q9UHY7 261 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 CSPG4Q6UVK1 2322 aa11.3□□□□□ -0.6
SF1-216ENST00000486867 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.29□□□□□ -0.61e-12■■■■□ 20.7
SF1-216ENST00000486867 FAM171A2A8MVW0 826 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 PRODHO43272 600 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 GLCEO94923 617 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 F12P00748 615 aaPredicted RBP11.29□□□□□ -0.6
SF1-216ENST00000486867 FAM157BP0CG42 384 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 CLUP10909 449 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 PAICSP22234 425 aaKnown RBP11.29□□□□□ -0.6
SF1-216ENST00000486867 POU1F1P28069 291 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 EPHA2P29317 976 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 FMO3P31513 532 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 HTR5AP47898 357 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 EFNA4P52798 201 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 GABPB1Q06547 395 aaPredicted RBP11.29□□□□□ -0.6
SF1-216ENST00000486867 ECH1Q13011 328 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 TMEM255AQ5JRV8 349 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 SLX4IPQ5VYV7 408 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 C12orf73Q69YU5 71 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 LRP11Q86VZ4 500 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 OR10H5Q8NGA6 315 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 OR10S1Q8NGN2 331 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 MAP6Q96JE9 813 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 C4orf45Q96LM5 186 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 SORCS2Q96PQ0 1159 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 CIB1Q99828 191 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 S100A14Q9HCY8 104 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 USE1Q9NZ43 259 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 MYEF2Q9P2K5 600 aaKnown RBP11.29□□□□□ -0.6
SF1-216ENST00000486867 EIF3KQ9UBQ5 218 aaKnown RBP11.29□□□□□ -0.6
SF1-216ENST00000486867 POLR1DQ9Y2S0 133 aa11.29□□□□□ -0.6
SF1-216ENST00000486867 FAM183AA6NL82 134 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 MITFO75030 526 aaPredicted RBP11.28□□□□□ -0.6
SF1-216ENST00000486867 NGFP01138 241 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 ALPLP05186 524 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 GYPBP06028 91 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 IGFBP5P24593 272 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 RGS6P49758 472 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 ENTPD1P49961 510 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 KLF3P57682 345 aaPredicted RBP11.28□□□□□ -0.6
SF1-216ENST00000486867 ERVS71-1P61550 626 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 PPP1CBP62140 327 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 SLC35D3Q5M8T2 416 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 TMEM236Q5W0B7 351 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 CORO6Q6QEF8 472 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 ARL9Q6T311 187 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 LYPD4Q6UWN0 246 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 RHOUQ7L0Q8 258 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 TIGD4Q8IY51 512 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 ZNF511Q8NB15 262 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 OR51L1Q8NGJ5 315 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 OR1J1Q8NGS3 322 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 SYNPRQ8TBG9 265 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 ST7LQ8TDW4 575 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 COX4I2Q96KJ9 171 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 Q96MF0 132 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 RBM4BQ9BQ04 359 aaKnown RBP11.28□□□□□ -0.6
SF1-216ENST00000486867 TEX12Q9BXU0 123 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 SEMA6AQ9H2E6 1030 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 MED20Q9H944 212 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 WDR76Q9H967 626 aa11.28□□□□□ -0.6
SF1-216ENST00000486867 ABCA2Q9BZC7 2435 aa11.27□□□□□ -0.6
SF1-216ENST00000486867 A0A096LNT2 108 aa11.27□□□□□ -0.61
SF1-216ENST00000486867 TVP23AA6NH52 213 aa11.27□□□□□ -0.61
SF1-216ENST00000486867 PRR23D1E9PI22 279 aaPredicted RBP11.27□□□□□ -0.61
SF1-216ENST00000486867 M0R233 179 aa11.27□□□□□ -0.61
SF1-216ENST00000486867 ABHD16AO95870 558 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms