RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 SFXN4Q6P4A7 337 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 TNFAIP8L2Q6P589 184 aaPredicted RBP9.56□□□□□ -0.88
DDX56-212ENST00000485367 FIGNL1Q6PIW4 674 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 LYPD4Q6UWN0 246 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 APOOLQ6UXV4 268 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 CHMP1BQ7LBR1 199 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 RRM2BQ7LG56 351 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 KRT74Q7RTS7 529 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 LHFPL3Q86UP9 236 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 RBM45Q8IUH3 476 aaKnown RBP9.56□□□□□ -0.88
DDX56-212ENST00000485367 GID4Q8IVV7 300 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 SAMD12Q8N8I0 201 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 SLC16A11Q8NCK7 471 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 FAM71CQ8NEG0 241 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 OR5T2Q8NGG2 359 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 ST8SIA4Q92187 359 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 HSD17B8Q92506 261 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 HOXB13Q92826 284 aaPredicted RBP9.56□□□□□ -0.88
DDX56-212ENST00000485367 WNT2BQ93097 391 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 G6PC3Q9BUM1 346 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 ZNF416Q9BWM5 594 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 REG4Q9BYZ8 158 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 ZCCHC3Q9NUD5 404 aaKnown RBP9.56□□□□□ -0.88
DDX56-212ENST00000485367 SDHAF2Q9NX18 166 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 ABRACLQ9P1F3 81 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 CSMD2Q7Z408 3487 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 NAP1L6A6NFF2 107 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 A8MXK9 166 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 LRRN3E7EW58 273 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 J3QRE1 110 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 ABCD4O14678 606 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 SURF4O15260 269 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 SSNA1O43805 119 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 FZD7O75084 574 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 TMEM127O75204 238 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 PEX14O75381 377 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 RCBTB2O95199 551 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 IL18BPO95998 194 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 SAGP10523 405 aaPredicted RBP9.55□□□□□ -0.88
DDX56-212ENST00000485367 CALCRP30988 508 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 MAP2K6P52564 334 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 C17orf67Q0P5P2 114 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 OPCMLQ14982 345 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 FBXL19-AS1Q494R0 122 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 SPDYE7PQ495Y7 208 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 METTL11BQ5VVY1 283 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 ZCCHC12Q6PEW1 402 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 ADGRE4PQ86SQ3 457 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 SPICQ8N5J4 248 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 EIF4E3Q8N5X7 224 aaKnown RBP9.55□□□□□ -0.88
DDX56-212ENST00000485367 COX18Q8N8Q8 333 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 ZFP41Q8N8Y5 198 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 OR2T35Q8NGX2 323 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 HAVCR2Q8TDQ0 301 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 YIPF5Q969M3 257 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 PINK1Q9BXM7 581 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 PLA2G12AQ9BZM1 189 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 TRIM36Q9NQ86 728 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 PCDHB16Q9NRJ7 776 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 SIRT3Q9NTG7 399 aaPredicted RBP9.55□□□□□ -0.88
DDX56-212ENST00000485367 BABAM2Q9NXR7 383 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 H2AFY2Q9P0M6 372 aaPredicted RBP9.55□□□□□ -0.88
DDX56-212ENST00000485367 PFDN2Q9UHV9 154 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 ZNF337Q9Y3M9 751 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 AKAP6Q13023 2319 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 F8W036 122 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 GATCO43716 136 aaKnown RBP9.55□□□□□ -0.88
DDX56-212ENST00000485367 GMDSO60547 372 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 HMGN2P05204 90 aaKnown RBP9.55□□□□□ -0.88
DDX56-212ENST00000485367 FPR3P25089 353 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 GIFP27352 417 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 CD79BP40259 229 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 LASP1Q14847 261 aaKnown RBP9.55□□□□□ -0.88
DDX56-212ENST00000485367 TRAM2Q15035 370 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 P4HA3Q7Z4N8 544 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 ZAR1Q86SH2 424 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 GCNT2Q8N0V5 402 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 FTMTQ8N4E7 242 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 MEIOBQ8N635 442 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 ACBD7Q8N6N7 88 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 GATSQ8NAP1 163 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 OR4C3Q8NH37 302 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 PIGXQ8TBF5 258 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 TRMT10AQ8TBZ6 339 aaKnown RBP9.55□□□□□ -0.88
DDX56-212ENST00000485367 SMPDL3BQ92485 455 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 CDS1Q92903 461 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 ZFP3Q96NJ6 502 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 UCN2Q96RP3 112 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 ABHD1Q96SE0 405 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 GPA33Q99795 319 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 RSPO3Q9BXY4 272 aaPredicted RBP9.55□□□□□ -0.88
DDX56-212ENST00000485367 FN3KQ9H479 309 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 FBXO34Q9NWN3 711 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 CRIM1Q9NZV1 1036 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 CLCF1Q9UBD9 225 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 FOXD3Q9UJU5 478 aaPredicted RBP9.55□□□□□ -0.88
DDX56-212ENST00000485367 RASD1Q9Y272 281 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 TMEM5Q9Y2B1 443 aa9.55□□□□□ -0.88
DDX56-212ENST00000485367 IGLV3-32A0A0A0MS00 114 aa9.54□□□□□ -0.88
DDX56-212ENST00000485367 A0A0G2JPF8 293 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms