RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 SFXN5Q8TD22 340 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 C10orf82Q8WW14 230 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 OR5P2Q8WZ92 322 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 NSMAFQ92636 917 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 ROPN1LQ96C74 230 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 MTERF3Q96E29 417 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 SLC35G5Q96KT7 338 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 LRR1Q96L50 414 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 RCHY1Q96PM5 261 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 OR2V2Q96R30 315 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 OR5M11Q96RB7 305 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 CCT7Q99832 543 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 MECRQ9BV79 373 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 PTDSS2Q9BVG9 487 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 SIRPDQ9H106 197 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 OR51I1Q9H343 314 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 C1orf198Q9H425 327 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 RLIMQ9NVW2 624 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 C1orf109Q9NX04 203 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 SLC17A7Q9P2U7 560 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 EIF3KQ9UBQ5 218 aaKnown RBP4.33□□□□□ -1.72
PTPN4-210ENST00000485247 CAB39Q9Y376 341 aaPredicted RBP4.33□□□□□ -1.72
PTPN4-210ENST00000485247 JRKLQ9Y4A0 524 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 CCL27Q9Y4X3 112 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 HERC2O95714 4834 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 CSMD3Q7Z407 3707 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 C5orf49A4QMS7 147 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 MS4A18H0YCH9 400 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 H3BUX3 64 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 AIM2O14862 343 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 EIF3HO15372 352 aaKnown RBP eCLIP4.32□□□□□ -1.72
PTPN4-210ENST00000485247 PEX14O75381 377 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 CRCPO75575 148 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 SERPINI2O75830 405 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 JTBO76095 146 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 FARS2O95363 451 aaKnown RBP4.32□□□□□ -1.72
PTPN4-210ENST00000485247 PAHP00439 452 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 HPRP00739 348 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 GSTA1P08263 222 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 INHBAP08476 426 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 NQO1P15559 274 aaKnown RBP4.32□□□□□ -1.72
PTPN4-210ENST00000485247 IL7RP16871 459 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 ZNF26P17031 533 aaPredicted RBP4.32□□□□□ -1.72
PTPN4-210ENST00000485247 NCF2P19878 526 aaPredicted RBP4.32□□□□□ -1.72
PTPN4-210ENST00000485247 TAC1P20366 129 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 IMPDH1P20839 514 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 STOMP27105 288 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 GRPRP30550 384 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 HPCAL1P37235 193 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 ACAA2P42765 397 aaKnown RBP4.32□□□□□ -1.72
PTPN4-210ENST00000485247 CSNK1A1P48729 337 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 COPZ1P61923 177 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 RPL38P63173 70 aaKnown RBP4.32□□□□□ -1.72
PTPN4-210ENST00000485247 HBA1P69905 142 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 MRPS25P82663 173 aaKnown RBP4.32□□□□□ -1.72
PTPN4-210ENST00000485247 HPCAP84074 193 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 HSF2Q03933 536 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 C2orf54Q08AI8 447 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 FUT5Q11128 374 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 PSG7Q13046 419 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 GFOD2Q3B7J2 385 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 MS4A18Q3C1V0 323 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 ZNF404Q494X3 552 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 SLC36A2Q495M3 483 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 GPAT3Q53EU6 434 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 TCTEX1D4Q5JR98 221 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 MRPL2Q5T653 305 aaKnown RBP4.32□□□□□ -1.72
PTPN4-210ENST00000485247 WBP2NLQ6ICG8 309 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 TNFAIP8L2Q6P589 184 aaPredicted RBP4.32□□□□□ -1.72
PTPN4-210ENST00000485247 WDR88Q6ZMY6 472 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 Q6ZR03 302 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 RFPL4BQ6ZWI9 263 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 H1FNTQ75WM6 255 aaPredicted RBP4.32□□□□□ -1.72
PTPN4-210ENST00000485247 SLC16A14Q7RTX9 510 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 VMO1Q7Z5L0 202 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 COMTD1Q86VU5 262 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 LRRC18Q8N456 261 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 PRR18Q8N4B5 295 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 PNLDC1Q8NA58 520 aaKnown RBP4.32□□□□□ -1.72
PTPN4-210ENST00000485247 RBM15BQ8NDT2 890 aaKnown RBP4.32□□□□□ -1.72
PTPN4-210ENST00000485247 OR4K5Q8NGD3 323 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 VANGL1Q8TAA9 524 aaPredicted RBP4.32□□□□□ -1.72
PTPN4-210ENST00000485247 OIT3Q8WWZ8 545 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 MOAP1Q96BY2 351 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 METTL2AQ96IZ6 378 aaKnown RBP4.32□□□□□ -1.72
PTPN4-210ENST00000485247 OSBPL9Q96SU4 736 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 NKX3-1Q99801 234 aaPredicted RBP4.32□□□□□ -1.72
PTPN4-210ENST00000485247 DCTN5Q9BTE1 182 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 DPY30Q9C005 99 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 A4GALTQ9NPC4 353 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 POLE3Q9NRF9 147 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 INPP5EQ9NRR6 644 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 TMEM38BQ9NVV0 291 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 DNAJB11Q9UBS4 358 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 IL19Q9UHD0 177 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 ATP6V1HQ9UI12 483 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 SLC45A2Q9UMX9 530 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 LSM4Q9Y4Z0 139 aaKnown RBP4.32□□□□□ -1.72
PTPN4-210ENST00000485247 MAB21L2Q9Y586 359 aa4.32□□□□□ -1.72
PTPN4-210ENST00000485247 NUP214P35658 2090 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms