RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 TAS2R16Q9NYV7 291 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 ZNF629Q9UEG4 869 aaPredicted RBP12.28□□□□□ -0.44
SMAD9-204ENST00000483941 GDF2Q9UK05 429 aaPredicted RBP12.28□□□□□ -0.44
SMAD9-204ENST00000483941 TIMM10BQ9Y5J6 103 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 FAM215AQ9Y5M1 114 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 MTORP42345 2549 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 DPPA5A6NC42 116 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 ZNF878C9JN71 531 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 PRSS44E7EML9 344 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 LRRTM2O43300 516 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 GPANK1O95872 356 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 CD1AP06126 327 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 H2BFMP0C1H6 154 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 GLI4P10075 376 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 CPEP16870 476 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 ARR3P36575 388 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 RGS6P49758 472 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 HCCSP53701 268 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 GP2P55259 537 aaKnown RBP12.27□□□□□ -0.45
SMAD9-204ENST00000483941 ARF1P84077 181 aaKnown RBP12.27□□□□□ -0.45
SMAD9-204ENST00000483941 TPBGQ13641 420 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 MEP1BQ16820 701 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 RPL22L1Q6P5R6 122 aaKnown RBP12.27□□□□□ -0.45
SMAD9-204ENST00000483941 LYPD4Q6UWN0 246 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 PLXDC2Q6UX71 529 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 ZGRF1Q86YA3 2104 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 KLBQ86Z14 1044 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 ALDH16A1Q8IZ83 802 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 ZNF485Q8NCK3 441 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 C1orf162Q8NEQ5 155 aaPredicted RBP12.27□□□□□ -0.45
SMAD9-204ENST00000483941 RNF133Q8WVZ7 376 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 NABP1Q96AH0 204 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 DGCR14Q96DF8 476 aaKnown RBP12.27□□□□□ -0.45
SMAD9-204ENST00000483941 FOXN4Q96NZ1 517 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 OR5M11Q96RB7 305 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 COQ7Q99807 217 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 ZNF416Q9BWM5 594 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 SP140LQ9H930 580 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 EMC7Q9NPA0 242 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 ASH2LQ9UBL3 628 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 COPS3Q9UNS2 423 aa12.27□□□□□ -0.45
SMAD9-204ENST00000483941 SVILO95425 2214 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 CCDC160A6NGH7 325 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 A6NHS1 94 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 DVL2O14641 736 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 TNFSF13O75888 250 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 IGHV3-9P01782 118 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 CD36P16671 472 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 HOXC12P31275 282 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 TMBIM6P55061 237 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 OR12D2P58182 307 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 PMPCAQ10713 525 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 ZNF829Q3KNS6 432 aaPredicted RBP12.26□□□□□ -0.45
SMAD9-204ENST00000483941 TP53I3Q53FA7 332 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 ZNF684Q5T5D7 378 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 SP5Q6BEB4 398 aaPredicted RBP12.26□□□□□ -0.45
SMAD9-204ENST00000483941 TMEM53Q6P2H8 277 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 MTFR2Q6P444 385 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 GDPGP1Q6ZNW5 385 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 SEM1Q6ZVN7 128 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 LRRC18Q8N456 261 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 MS4A15Q8N5U1 240 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 ST7LQ8TDW4 575 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 RAB2BQ8WUD1 216 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 RND1Q92730 232 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 THRSPQ92748 146 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 STARD4Q96DR4 205 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 SLAMF6Q96DU3 332 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 BOD1Q96IK1 185 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 HDHD5Q9BXW7 423 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 HDHD2Q9H0R4 259 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 ELOVL3Q9HB03 270 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 CENPMQ9NSP4 180 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 ATPIF1Q9UII2 106 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 FBXL3Q9UKT7 428 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 LHFPL6Q9Y693 200 aa12.26□□□□□ -0.45
SMAD9-204ENST00000483941 GTF3C1Q12789 2109 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 TRGV8A0A0C4DH27 118 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 CIB4A0PJX0 185 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 ACOD1A6NK06 481 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 MSTNO14793 375 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 ZNHIT1O43257 154 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 PLPP2O43688 288 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 GPRIN2O60269 458 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 ZG16O60844 167 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 UBL3O95164 117 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 SERPINA3P01011 423 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 ADRA2AP08913 450 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 B4GALT1P15291 398 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 GALP22466 123 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 HSD11B1P28845 292 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 GABRA5P31644 462 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 CA7P43166 264 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 PLP2Q04941 152 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 ENDOGQ14249 297 aaKnown RBP12.25□□□□□ -0.45
SMAD9-204ENST00000483941 RAB35Q15286 201 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 TSTQ16762 297 aaKnown RBP12.25□□□□□ -0.45
SMAD9-204ENST00000483941 KRTAP21-3Q3LHN1 58 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 ELFN2Q5R3F8 820 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 LIPNQ5VXI9 398 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms