RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 TRAPPC6AO75865 159 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 WDPCPO95876 746 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 F10P00742 488 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 MAS1P04201 325 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 HPNP05981 417 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 CD2P06729 351 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 KIR2DL3P43628 341 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 CLDN15P56746 228 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 OR1C1Q15619 314 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 PHYHD1Q5SRE7 291 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 ABLIM2Q6H8Q1 611 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 MZT2BQ6NZ67 158 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 KLHL24Q6TFL4 600 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 FCRLAQ7L513 359 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 ELMOD2Q8IZ81 293 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 DTX3Q8N9I9 347 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 DUSP18Q8NEJ0 188 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 RAB40AQ8WXH6 277 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 SLC39A7Q92504 469 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 ZNF703Q9H7S9 590 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-225ENST00000483495 PNRC2Q9NPJ4 139 aaKnown RBP11.72□□□□□ -0.53
CPNE1-225ENST00000483495 NPAP1Q9NZP6 1156 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 STEAP1Q9UHE8 339 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 POLR1DQ9Y2S0 133 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 SPAARA0A1B0GVQ0 90 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 ZNF716A6NP11 495 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 LANCL1O43813 399 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 ADRB1P08588 477 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 PSMA6P60900 246 aaKnown RBP11.72□□□□□ -0.53
CPNE1-225ENST00000483495 BCL2L15Q5TBC7 163 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 FAM166AQ6J272 317 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 C20orf196Q8IYI0 205 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 UBQLNLQ8IYU4 475 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 CLEC1AQ8NC01 280 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 DNAAF1Q8NEP3 725 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 OR6N1Q8NGY5 312 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 PNPLA2Q96AD5 504 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 NELFAQ9H3P2 528 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 MOB1AQ9H8S9 216 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 ASH2LQ9UBL3 628 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 CLEC4AQ9UMR7 237 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 RCE1Q9Y256 329 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 H3BSH0 61 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 TPPPO94811 219 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 TTRP02766 147 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 POU3F2P20265 443 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-225ENST00000483495 MSR1P21757 451 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 MNDAP41218 407 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 EIF1AXP47813 144 aaKnown RBP11.71□□□□□ -0.53
CPNE1-225ENST00000483495 INPP1P49441 399 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 SELENOPP49908 381 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 CLDN12P56749 244 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 AGAP6Q5VW22 663 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 SULF2Q8IWU5 870 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 PRSS33Q8NF86 280 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 OR10D3Q8NH80 312 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 ENKURQ8TC29 256 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 YIPF5Q969M3 257 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 NABP1Q96AH0 204 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 HAVCR1Q96D42 359 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 AGAP4Q96P64 663 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 PBOV1Q9GZY1 135 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 HDHD2Q9H0R4 259 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 CKLFQ9UBR5 152 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 B4GALT7Q9UBV7 327 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 NUFIP1Q9UHK0 495 aaKnown RBP11.71□□□□□ -0.53
CPNE1-225ENST00000483495 FLVCR1Q9Y5Y0 555 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 CACNA1CQ13936 2221 aa11.71□□□□□ -0.53
CPNE1-225ENST00000483495 DHHO43323 396 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 EEF1E1O43324 174 aaKnown RBP11.7□□□□□ -0.54
CPNE1-225ENST00000483495 CXCL13O43927 109 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 ACSM4P0C7M7 580 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 CTSSP25774 331 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 STARP49675 285 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 SOX8P57073 446 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 CD300CQ08708 224 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 SLC36A2Q495M3 483 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 ZNF57Q68EA5 555 aaPredicted RBP11.7□□□□□ -0.54
CPNE1-225ENST00000483495 IGF2-ASQ6U949 168 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 MDS2Q8NDY4 140 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 OR13C3Q8NGS6 347 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 SMIM4Q8WVI0 70 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 ZNF416Q9BWM5 594 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 MMP28Q9H239 520 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 DDX28Q9NUL7 540 aaKnown RBP11.7□□□□□ -0.54
CPNE1-225ENST00000483495 NCKAP5O14513 1909 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 MEGF11A6BM72 1044 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 SLC17A2O00624 439 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 RER1O15258 196 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 SULT1B1O43704 296 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 GUCA1AP43080 201 aaPredicted RBP11.7□□□□□ -0.54
CPNE1-225ENST00000483495 ART1P52961 327 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 GRB2P62993 217 aaKnown RBP11.7□□□□□ -0.54
CPNE1-225ENST00000483495 HIST1H3AP68431 136 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 ENDOGQ14249 297 aaKnown RBP11.7□□□□□ -0.54
CPNE1-225ENST00000483495 HYAL4Q2M3T9 481 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 HIST2H3PS2Q5TEC6 136 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 LINC00696Q6ZRV3 163 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 HIST2H3AQ71DI3 136 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 GALNT16Q8N428 558 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms