RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 ARHGAP24Q8N264 748 aa9.59□□□□□ -0.87
SORT1-204ENST00000482236 LINC00471Q8N535 108 aa9.59□□□□□ -0.87
SORT1-204ENST00000482236 ATG16L2Q8NAA4 619 aa9.59□□□□□ -0.87
SORT1-204ENST00000482236 GJC3Q8NFK1 279 aa9.59□□□□□ -0.87
SORT1-204ENST00000482236 OR2Z1Q8NG97 314 aa9.59□□□□□ -0.87
SORT1-204ENST00000482236 OR51F2Q8NH61 342 aa9.59□□□□□ -0.87
SORT1-204ENST00000482236 OR1F12Q8NHA8 337 aa9.59□□□□□ -0.87
SORT1-204ENST00000482236 CLDND2Q8NHS1 167 aa9.59□□□□□ -0.87
SORT1-204ENST00000482236 TMEM158Q8WZ71 300 aa9.59□□□□□ -0.87
SORT1-204ENST00000482236 GTF3AQ92664 365 aaKnown RBP9.59□□□□□ -0.87
SORT1-204ENST00000482236 YIPF5Q969M3 257 aa9.59□□□□□ -0.87
SORT1-204ENST00000482236 NMNAT3Q96T66 252 aa9.59□□□□□ -0.87
SORT1-204ENST00000482236 REPIN1Q9BWE0 567 aaKnown RBP9.59□□□□□ -0.87
SORT1-204ENST00000482236 FN3KQ9H479 309 aa9.59□□□□□ -0.87
SORT1-204ENST00000482236 MSL2Q9HCI7 577 aa9.59□□□□□ -0.87
SORT1-204ENST00000482236 IL1RAPQ9NPH3 570 aa9.59□□□□□ -0.87
SORT1-204ENST00000482236 PTTG3PQ9NZH4 202 aa9.59□□□□□ -0.87
SORT1-204ENST00000482236 VSX1Q9NZR4 365 aaPredicted RBP9.59□□□□□ -0.87
SORT1-204ENST00000482236 TMEFF2Q9UIK5 374 aaPredicted RBP9.59□□□□□ -0.87
SORT1-204ENST00000482236 ZDHHC8Q9ULC8 765 aa9.59□□□□□ -0.87
SORT1-204ENST00000482236 SAMHD1Q9Y3Z3 626 aaKnown RBP9.59□□□□□ -0.87
SORT1-204ENST00000482236 SONP18583 2426 aaKnown RBP9.58□□□□□ -0.88
SORT1-204ENST00000482236 ABCA1O95477 2261 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 ZNF469Q96JG9 3925 aaPredicted RBP9.58□□□□□ -0.88
SORT1-204ENST00000482236 LILRA1O75019 489 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 E2F6O75461 281 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 MPZL1O95297 269 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 NGFP01138 241 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 IFNGP01579 166 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 IGHV1-46P01743 117 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 TACSTD2P09758 323 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 COX5BP10606 129 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 TNFRSF1AP19438 455 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 ATP6V1B2P21281 511 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 IL2RGP31785 369 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 SLC6A9P48067 706 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 RAD23AP54725 363 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 LSM6P62312 80 aaKnown RBP9.58□□□□□ -0.88
SORT1-204ENST00000482236 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.58□□□□□ -0.88
SORT1-204ENST00000482236 TSPAN31Q12999 210 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 MALLQ13021 153 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 RIN1Q13671 783 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 MEP1BQ16820 701 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 MBNL2Q5VZF2 373 aaKnown RBP9.58□□□□□ -0.88
SORT1-204ENST00000482236 FOXL2NBQ6ZUU3 175 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 PTCHD4Q6ZW05 846 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 LINC00346Q8IVM7 164 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 OR5AS1Q8N127 324 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 AQP11Q8NBQ7 271 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 OR9Q2Q8NGE9 314 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 OR52E2Q8NGJ4 325 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 ST7LQ8TDW4 575 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 POP5Q969H6 163 aaKnown RBP9.58□□□□□ -0.88
SORT1-204ENST00000482236 MARS2Q96GW9 593 aaKnown RBP9.58□□□□□ -0.88
SORT1-204ENST00000482236 TSSK2Q96PF2 358 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 DCLRE1CQ96SD1 692 aaKnown RBP9.58□□□□□ -0.88
SORT1-204ENST00000482236 HCAR1Q9BXC0 346 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 HDHD2Q9H0R4 259 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 OCEL1Q9H607 264 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 EGLN3Q9H6Z9 239 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 ACTR3BQ9P1U1 418 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 CDH10Q9Y6N8 788 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 U3KQV3 271 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 CHD3Q12873 2000 aaKnown RBP9.58□□□□□ -0.88
SORT1-204ENST00000482236 VPS13CQ709C8 3753 aa9.58□□□□□ -0.88
SORT1-204ENST00000482236 ARFGEF3Q5TH69 2177 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 ZSCAN5BA6NJL1 495 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 RIIAD1A6NNX1 92 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 F5H5K5 113 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 H3BN98 237 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 IMPA2O14732 288 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 RER1O15258 196 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 PHF1O43189 567 aaPredicted RBP9.57□□□□□ -0.88
SORT1-204ENST00000482236 IDH3BO43837 385 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 PTP4A3O75365 173 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 GPANK1O95872 356 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 MSMBP08118 114 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 HIST1H1CP16403 213 aaKnown RBP9.57□□□□□ -0.88
SORT1-204ENST00000482236 ZNF26P17031 533 aaPredicted RBP9.57□□□□□ -0.88
SORT1-204ENST00000482236 TUBG1P23258 451 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 CDKN2AP42771 156 aaKnown RBP9.57□□□□□ -0.88
SORT1-204ENST00000482236 CRYBB2P43320 205 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 DVL1P1P54792 670 aaPredicted RBP9.57□□□□□ -0.88
SORT1-204ENST00000482236 FHL1Q13642 323 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 LIPNQ5VXI9 398 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 FAHD2BQ6P2I3 314 aaPredicted RBP9.57□□□□□ -0.88
SORT1-204ENST00000482236 PGBD2Q6P3X8 592 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 CORO6Q6QEF8 472 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 ZNF620Q6ZNG0 422 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 CXXC5Q7LFL8 322 aaKnown RBP9.57□□□□□ -0.88
SORT1-204ENST00000482236 TSEN54Q7Z6J9 526 aaKnown RBP9.57□□□□□ -0.88
SORT1-204ENST00000482236 TEX29Q8N6K0 151 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 FITM2Q8N6M3 262 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 OR4C15Q8NGM1 316 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 OR2T4Q8NH00 348 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 TEX47Q8TBZ9 253 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 SLC7A6Q92536 515 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 CMBLQ96DG6 245 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 FAHD2AQ96GK7 314 aa9.57□□□□□ -0.88
SORT1-204ENST00000482236 DHRS1Q96LJ7 313 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms