RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 SLC1A6P48664 564 aa12.35□□□□□ -0.43
HDAC6-224ENST00000481929 ERFP50548 548 aa12.35□□□□□ -0.43
HDAC6-224ENST00000481929 CDK6Q00534 326 aa12.35□□□□□ -0.43
HDAC6-224ENST00000481929 RPL18Q07020 188 aaKnown RBP12.35□□□□□ -0.43
HDAC6-224ENST00000481929 OR4S1Q8NGB4 309 aa12.35□□□□□ -0.43
HDAC6-224ENST00000481929 ANP32BQ92688 251 aaKnown RBP12.35□□□□□ -0.43
HDAC6-224ENST00000481929 NMD3Q96D46 503 aaKnown RBP12.35□□□□□ -0.43
HDAC6-224ENST00000481929 SIRPDQ9H106 197 aa12.35□□□□□ -0.43
HDAC6-224ENST00000481929 MMADHCQ9H3L0 296 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-224ENST00000481929 INIPQ9NRY2 104 aa12.35□□□□□ -0.43
HDAC6-224ENST00000481929 ERVK-18Q9QC07 812 aa12.35□□□□□ -0.43
HDAC6-224ENST00000481929 HAO1Q9UJM8 370 aa12.35□□□□□ -0.43
HDAC6-224ENST00000481929 STARD10Q9Y365 291 aa12.35□□□□□ -0.43
HDAC6-224ENST00000481929 CAB39Q9Y376 341 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-224ENST00000481929 CPSF4LA6NMK7 179 aaKnown RBP12.34□□□□□ -0.43
HDAC6-224ENST00000481929 M0R3H8 397 aa12.34□□□□□ -0.43
HDAC6-224ENST00000481929 FBP1P09467 338 aa12.34□□□□□ -0.43
HDAC6-224ENST00000481929 COX5BP10606 129 aa12.34□□□□□ -0.43
HDAC6-224ENST00000481929 IDO1P14902 403 aa12.34□□□□□ -0.43
HDAC6-224ENST00000481929 RAC2P15153 192 aa12.34□□□□□ -0.43
HDAC6-224ENST00000481929 PSMB10P40306 273 aa12.34□□□□□ -0.43
HDAC6-224ENST00000481929 COX10Q12887 443 aa12.34□□□□□ -0.43
HDAC6-224ENST00000481929 SLC35E4Q6ICL7 350 aa12.34□□□□□ -0.43
HDAC6-224ENST00000481929 SLC25A47Q6Q0C1 308 aa12.34□□□□□ -0.43
HDAC6-224ENST00000481929 ARMC8Q8IUR7 673 aa12.34□□□□□ -0.43
HDAC6-224ENST00000481929 PDZD9Q8IXQ8 264 aa12.34□□□□□ -0.43
HDAC6-224ENST00000481929 OR13G1Q8NGZ3 307 aa12.34□□□□□ -0.43
HDAC6-224ENST00000481929 CFHR4Q92496 578 aa12.34□□□□□ -0.43
HDAC6-224ENST00000481929 HDAC2Q92769 488 aaKnown RBP12.34□□□□□ -0.43
HDAC6-224ENST00000481929 PTP4A1Q93096 173 aa12.34□□□□□ -0.43
HDAC6-224ENST00000481929 PAIP1Q9H074 479 aaKnown RBP12.34□□□□□ -0.43
HDAC6-224ENST00000481929 ZNRD1Q9P1U0 126 aa12.34□□□□□ -0.43
HDAC6-224ENST00000481929 C12orf71A8MTZ7 269 aa12.33□□□□□ -0.44
HDAC6-224ENST00000481929 SERPINB7O75635 380 aa12.33□□□□□ -0.44
HDAC6-224ENST00000481929 AQP1P29972 269 aa12.33□□□□□ -0.44
HDAC6-224ENST00000481929 HTR5AP47898 357 aa12.33□□□□□ -0.44
HDAC6-224ENST00000481929 ENTPD8Q5MY95 495 aa12.33□□□□□ -0.44
HDAC6-224ENST00000481929 ARMC4Q5T2S8 1044 aa12.33□□□□□ -0.44
HDAC6-224ENST00000481929 C11orf88Q6PI97 169 aa12.33□□□□□ -0.44
HDAC6-224ENST00000481929 PIP4P2Q8N4L2 257 aa12.33□□□□□ -0.44
HDAC6-224ENST00000481929 GOLGA6L1Q8N7Z2 621 aa12.33□□□□□ -0.44
HDAC6-224ENST00000481929 SPERTQ8NA61 448 aa12.33□□□□□ -0.44
HDAC6-224ENST00000481929 OR8G5Q8NG78 346 aa12.33□□□□□ -0.44
HDAC6-224ENST00000481929 GTF2H4Q92759 462 aa12.33□□□□□ -0.44
HDAC6-224ENST00000481929 ITPKCQ96DU7 683 aa12.33□□□□□ -0.44
HDAC6-224ENST00000481929 PNPOQ9NVS9 261 aa12.33□□□□□ -0.44
HDAC6-224ENST00000481929 LGALS13Q9UHV8 139 aa12.33□□□□□ -0.44
HDAC6-224ENST00000481929 TMCC3Q9ULS5 477 aa12.33□□□□□ -0.44
HDAC6-224ENST00000481929 SLC7A7Q9UM01 511 aa12.33□□□□□ -0.44
HDAC6-224ENST00000481929 FOXJ3Q9UPW0 622 aa12.33□□□□□ -0.44
HDAC6-224ENST00000481929 ANGPT4Q9Y264 503 aa12.33□□□□□ -0.44
HDAC6-224ENST00000481929 A0A1W2PPL8 197 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 F5H5P2 479 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 RNASEK-C17orf49H0YIS7 233 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 BIRC5O15392 142 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 TYROBPO43914 113 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 DOK2O60496 412 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 LYPD3O95274 346 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 VIMP08670 466 aaKnown RBP12.32□□□□□ -0.44
HDAC6-224ENST00000481929 MSR1P21757 451 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 SLC6A2P23975 617 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 PMELP40967 661 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 EFNB2P52799 333 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 ARF6P62330 175 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 SCARB2Q14108 478 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 ENDOGQ14249 297 aaKnown RBP12.32□□□□□ -0.44
HDAC6-224ENST00000481929 FOXB2Q5VYV0 432 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 C1orf94Q6P1W5 598 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 CCBE1Q6UXH8 406 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-224ENST00000481929 SYT9Q86SS6 491 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 SLC30A8Q8IWU4 369 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 KLHDC1Q8N7A1 406 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 C19orf18Q8NEA5 215 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 OR11L1Q8NGX0 322 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 ADAMTS16Q8TE57 1224 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 MPP4Q96JB8 637 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 ZNF582Q96NG8 517 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-224ENST00000481929 PPA2Q9H2U2 334 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 WDR55Q9H6Y2 383 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-224ENST00000481929 ZIM2Q9NZV7 527 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 CTSZQ9UBR2 303 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 SIGLEC9Q9Y336 463 aa12.32□□□□□ -0.44
HDAC6-224ENST00000481929 ELOVL7A1L3X0 281 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 TRAPPC13A5PLN9 417 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 NPIPB13A6NJU9 1138 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 NPIPB4C9JG80 1138 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 MLNRO43193 412 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 THY1P04216 161 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 AQP2P41181 271 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 POLR2JP52435 117 aaKnown RBP12.31□□□□□ -0.44
HDAC6-224ENST00000481929 NPTX1Q15818 432 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 KCNJ8Q15842 424 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 NXNQ6DKJ4 435 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 OR2T2Q6IF00 324 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 SLC2A7Q6PXP3 512 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 C1orf122Q6ZSJ8 110 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 CLDN22Q8N7P3 220 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 SMYD1Q8NB12 490 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 OR6T1Q8NGN1 323 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 OR5R1Q8NH85 324 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms