RNA–Protein interactions for RNA: ENST00000480884.5

CCDC66-217, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,447 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-217ENST00000480884 NXF2Q9GZY0 626 aaKnown RBP3.19□□□□□ -1.9
CCDC66-217ENST00000480884 LIME1Q9H400 295 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 SLC2A6Q9UGQ3 507 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 NDRG2Q9UN36 371 aaKnown RBP3.19□□□□□ -1.9
CCDC66-217ENST00000480884 ZNF337Q9Y3M9 751 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 PREX1Q8TCU6 1659 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 SRCAPQ6ZRS2 3230 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 SMIM23A6NLE4 172 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 E9PAM4 449 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 NPIPB9F8W1W9 429 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 G3V2L1 256 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 KCNK1O00180 336 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 DFFAO00273 331 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 SLC16A4O15374 487 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 GAGE7O76087 117 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 PMS2P2O95744 297 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 TYMSP04818 313 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 HMGN1P05114 100 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 MELTFP08582 738 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 GAGE12FP0CL80 117 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 GAGE12GP0CL81 117 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 GAGE12IP0CL82 117 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 SLC2A2P11168 524 aaPredicted RBP3.19□□□□□ -1.9
CCDC66-217ENST00000480884 TCP1P17987 556 aaKnown RBP3.19□□□□□ -1.9
CCDC66-217ENST00000480884 RAB4AP20338 218 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 NR4A2P43354 598 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 ABCE1P61221 599 aaKnown RBP3.19□□□□□ -1.9
CCDC66-217ENST00000480884 FOXF2Q12947 444 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 GAGE1Q13065 139 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 GAGE4Q13068 117 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 PDIA2Q13087 525 aaKnown RBP3.19□□□□□ -1.9
CCDC66-217ENST00000480884 UNC119Q13432 240 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 FLOT2Q14254 428 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 GNMTQ14749 295 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 CPTPQ5TA50 214 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 SH2D5Q6ZV89 423 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 PRSS41Q7RTY9 318 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 TRAPPC5Q8IUR0 188 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 TMEM199Q8N511 208 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 OR11L1Q8NGX0 322 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 OR5AK3PQ8NH89 298 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 MAPK15Q8TD08 544 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 ARPC1AQ92747 370 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 CLDN23Q96B33 292 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 TLCD1Q96CP7 247 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 SMIM19Q96E16 107 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 POM121L2Q96KW2 1035 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 MCHR1Q99705 422 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 FAM173AQ9BQD7 235 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 TM2D1Q9BX74 207 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 FAM107BQ9H098 131 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 MFSD1Q9H3U5 465 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 AMBNQ9NP70 447 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 FBXO8Q9NRD0 319 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 PRODH2Q9UF12 536 aa3.19□□□□□ -1.9
CCDC66-217ENST00000480884 BRCA1P38398 1863 aaKnown RBP3.18□□□□□ -1.9
CCDC66-217ENST00000480884 SMKR1H3BMG3 65 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 PHF1O43189 567 aaPredicted RBP3.18□□□□□ -1.9
CCDC66-217ENST00000480884 CD8AP01732 235 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 IGHV3-9P01782 118 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 CALB1P05937 261 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 OR9G9P0C7N8 305 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 ZNF17P17021 662 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 TBPP20226 339 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 CA6P23280 308 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 FOXN2P32314 431 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 TFPI2P48307 235 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 PTH2RP49190 550 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 APOC4P55056 127 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 ARL16Q0P5N6 197 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 SRSF6Q13247 344 aaKnown RBP3.18□□□□□ -1.9
CCDC66-217ENST00000480884 PRPSAP1Q14558 356 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 SIRPB2Q5JXA9 342 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 FAM219BQ5XKK7 198 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 THOC6Q86W42 341 aaKnown RBP3.18□□□□□ -1.9
CCDC66-217ENST00000480884 IFNEQ86WN2 208 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 PDIK1LQ8N165 341 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 OR52B6Q8NGF0 335 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 FAM172AQ8WUF8 416 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 TRUB1Q8WWH5 349 aaKnown RBP3.18□□□□□ -1.9
CCDC66-217ENST00000480884 RASL11BQ9BPW5 248 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 TMEM208Q9BTX3 173 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 RNF41Q9H4P4 317 aaPredicted RBP3.18□□□□□ -1.9
CCDC66-217ENST00000480884 C19orf12Q9NSK7 152 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 NDE1Q9NXR1 346 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 VAPAQ9P0L0 249 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 NYAP2Q9P242 653 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 IL36RNQ9UBH0 155 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 MLXQ9UH92 298 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 L3MBTL1Q9Y468 752 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 NACADO15069 1562 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 CEMIPQ8WUJ3 1361 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 COL22A1Q8NFW1 1626 aaPredicted RBP3.18□□□□□ -1.9
CCDC66-217ENST00000480884 GREB1LQ9C091 1923 aaPredicted RBP3.18□□□□□ -1.9
CCDC66-217ENST00000480884 LOC100131303A0A0U1RQF7 123 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 ZNF816-ZNF321PA0A0X1KG74 233 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 FAM166BA8MTA8 275 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 CDC7O00311 574 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 ZNF749O43361 778 aa3.18□□□□□ -1.9
CCDC66-217ENST00000480884 RAMP1O60894 148 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms