RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	KCNS3	Q9BQ31	491 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	CRLF2	Q9HC73	371 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	GPR35	Q9HC97	309 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	OBP2B	Q9NPH6	170 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	CMC2	Q9NRP2	79 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	SMPD3	Q9NY59	655 aa	Predicted RBP	13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	IL20RA	Q9UHF4	553 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	ADAM18	Q9Y3Q7	739 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	TRAV20	A0A0B4J274	112 aa		13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	ZNF99	A8MXY4	864 aa	Predicted RBP	13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894		H0YJX3	145 aa		13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	SOCS2	O14508	198 aa		13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	DHH	O43323	396 aa		13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	PNP	P00491	289 aa		13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	QDPR	P09417	244 aa		13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	NTF4	P34130	210 aa		13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	ZNF133	P52736	654 aa	Predicted RBP	13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	UBA52	P62987	128 aa	Known RBP	13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	PTGES3	Q15185	160 aa	Known RBP	13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	C10orf128	Q5T292	105 aa		13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	OGFRL1	Q5TC84	451 aa	Predicted RBP	13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	ANKRD16	Q6P6B7	361 aa		13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	OR52E2	Q8NGJ4	325 aa		13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	OR2T4	Q8NH00	348 aa		13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	OR51F2	Q8NH61	342 aa		13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	TRUB1	Q8WWH5	349 aa	Known RBP	13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	WAC	Q9BTA9	647 aa		13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	KCNN2	Q9H2S1	579 aa		13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	RIBC2	Q9H4K1	309 aa		13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	ESM1	Q9NQ30	184 aa		13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	VSX1	Q9NZR4	365 aa	Predicted RBP	13.36	□□□□□ -0.27
HDLBP-238	ENST00000479894	SLC22A23	A1A5C7	686 aa		13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	MPZL2	O60487	215 aa		13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	KHDRBS3	O75525	346 aa	Known RBP	13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	UPK3A	O75631	287 aa		13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	ATP6V1G2	O95670	118 aa		13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	CRYAA	P02489	173 aa		13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	SNAPC1	Q16533	368 aa		13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	C3orf36	Q3SXR2	165 aa		13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	TTC23	Q5W5X9	447 aa		13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	LEG1	Q6P5S2	330 aa		13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	SYT14	Q8NB59	555 aa		13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	OR4K13	Q8NH42	304 aa		13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	HDAC2	Q92769	488 aa	Known RBP	13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	MCHR2	Q969V1	340 aa		13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	RASD2	Q96D21	266 aa		13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	DOK1	Q99704	481 aa		13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	RACGAP1	Q9H0H5	632 aa		13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	ZNF442	Q9H7R0	627 aa		13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	DDX28	Q9NUL7	540 aa	Known RBP	13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	FBXL3	Q9UKT7	428 aa		13.35	□□□□□ -0.27
HDLBP-238	ENST00000479894	IGHV1-18	A0A0C4DH31	117 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	SNTN	A6NMZ2	147 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	ZAR1L	A6NP61	321 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	POM121C	A8CG34	1229 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	VSTM5	A8MXK1	200 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	HIST1H1C	P16403	213 aa	Known RBP	13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	HSPA13	P48723	471 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	SLC25A1	P53007	311 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	UBE2N	P61088	152 aa	Known RBP	13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	GLO1	Q04760	184 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	LRRC36	Q1X8D7	754 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	CEACAM16	Q2WEN9	425 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	MEST	Q5EB52	335 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	SLC35F1	Q5T1Q4	408 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	SLX4IP	Q5VYV7	408 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	ZNF627	Q7L945	461 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	C1QL2	Q7Z5L3	287 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	NUP37	Q8NFH4	326 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	OR4F15	Q8NGB8	312 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	OR8D4	Q8NGM9	314 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	CLDND2	Q8NHS1	167 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	APOL4	Q9BPW4	351 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	SLITRK2	Q9H156	845 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	FN3K	Q9H479	309 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	IMPAD1	Q9NX62	359 aa		13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	H2AFY2	Q9P0M6	372 aa	Predicted RBP	13.34	□□□□□ -0.27
HDLBP-238	ENST00000479894	PRR23D1	E9PI22	279 aa	Predicted RBP	13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	SLC16A7	O60669	478 aa		13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	MITF	O75030	526 aa	Predicted RBP	13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	OR8G3P	P0DMU2	310 aa		13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	PEX2	P28328	305 aa		13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	PCBD1	P61457	104 aa		13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	MRPS34	P82930	218 aa	Known RBP	13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	LPCAT4	Q643R3	524 aa		13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	LRFN4	Q6PJG9	635 aa		13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	ZNF813	Q6ZN06	617 aa		13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	GLB1L2	Q8IW92	636 aa		13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	GALNT4	Q8N4A0	578 aa		13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	OR8J1	Q8NGP2	316 aa		13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	OR4Q3	Q8NH05	313 aa		13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	FAHD2A	Q96GK7	314 aa		13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	HRASLS5	Q96KN8	279 aa		13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	NMNAT3	Q96T66	252 aa		13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	SLC29A1	Q99808	456 aa		13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms