RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 MAGEB18Q96M61 343 aa14.34□□□□□ -0.11
HMGN1-212ENST00000479586 WDFY2Q96P53 400 aa14.34□□□□□ -0.11
HMGN1-212ENST00000479586 TECTBQ96PL2 329 aa14.34□□□□□ -0.11
HMGN1-212ENST00000479586 ZNF426Q9BUY5 554 aa14.34□□□□□ -0.11
HMGN1-212ENST00000479586 RASSF4Q9H2L5 321 aa14.34□□□□□ -0.11
HMGN1-212ENST00000479586 DPAGT1Q9H3H5 408 aa14.34□□□□□ -0.11
HMGN1-212ENST00000479586 MEPEQ9NQ76 525 aaPredicted RBP14.34□□□□□ -0.11
HMGN1-212ENST00000479586 SDR39U1Q9NRG7 319 aaPredicted RBP14.34□□□□□ -0.11
HMGN1-212ENST00000479586 NECAP2Q9NVZ3 263 aa14.34□□□□□ -0.11
HMGN1-212ENST00000479586 NDRG4Q9ULP0 352 aaKnown RBP14.34□□□□□ -0.11
HMGN1-212ENST00000479586 GPR37O15354 613 aa14.33□□□□□ -0.12
HMGN1-212ENST00000479586 SERPINB7O75635 380 aa14.33□□□□□ -0.12
HMGN1-212ENST00000479586 FSTL3O95633 263 aa14.33□□□□□ -0.12
HMGN1-212ENST00000479586 PCBD1P61457 104 aa14.33□□□□□ -0.12
HMGN1-212ENST00000479586 GUCY1A3Q02108 690 aa14.33□□□□□ -0.12
HMGN1-212ENST00000479586 IFFO1Q0D2I5 559 aa14.33□□□□□ -0.12
HMGN1-212ENST00000479586 HERPUD1Q15011 391 aa14.33□□□□□ -0.12
HMGN1-212ENST00000479586 ZNF181Q2M3W8 571 aa14.33□□□□□ -0.12
HMGN1-212ENST00000479586 DCDC5Q6ZRR9 648 aa14.33□□□□□ -0.12
HMGN1-212ENST00000479586 VASH1Q7L8A9 365 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-212ENST00000479586 RBM45Q8IUH3 476 aaKnown RBP14.33□□□□□ -0.12
HMGN1-212ENST00000479586 PDZD9Q8IXQ8 264 aa14.33□□□□□ -0.12
HMGN1-212ENST00000479586 C11orf44Q8N8P7 122 aa14.33□□□□□ -0.12
HMGN1-212ENST00000479586 SCCPDHQ8NBX0 429 aa14.33□□□□□ -0.12
HMGN1-212ENST00000479586 GPR32P1Q8NGA4 272 aa14.33□□□□□ -0.12
HMGN1-212ENST00000479586 OR4D11Q8NGI4 311 aa14.33□□□□□ -0.12
HMGN1-212ENST00000479586 MOSPD2Q8NHP6 518 aa14.33□□□□□ -0.12
HMGN1-212ENST00000479586 SGCDQ92629 289 aa14.33□□□□□ -0.12
HMGN1-212ENST00000479586 TOR3AQ9H497 397 aa14.33□□□□□ -0.12
HMGN1-212ENST00000479586 EVA1AQ9H8M9 152 aa14.33□□□□□ -0.12
HMGN1-212ENST00000479586 SLAMF8Q9P0V8 285 aa14.33□□□□□ -0.12
HMGN1-212ENST00000479586 LRRC30A6NM36 301 aa14.32□□□□□ -0.12
HMGN1-212ENST00000479586 HDAC3O15379 428 aa14.32□□□□□ -0.12
HMGN1-212ENST00000479586 OPN1SWP03999 348 aa14.32□□□□□ -0.12
HMGN1-212ENST00000479586 TUBG1P23258 451 aa14.32□□□□□ -0.12
HMGN1-212ENST00000479586 SLC6A2P23975 617 aa14.32□□□□□ -0.12
HMGN1-212ENST00000479586 PSMB10P40306 273 aa14.32□□□□□ -0.12
HMGN1-212ENST00000479586 HTR5AP47898 357 aa14.32□□□□□ -0.12
HMGN1-212ENST00000479586 SRP9P49458 86 aaKnown RBP14.32□□□□□ -0.12
HMGN1-212ENST00000479586 HOXA4Q00056 320 aaPredicted RBP14.32□□□□□ -0.12
HMGN1-212ENST00000479586 DUSP7Q16829 419 aa14.32□□□□□ -0.12
HMGN1-212ENST00000479586 C1orf94Q6P1W5 598 aa14.32□□□□□ -0.12
HMGN1-212ENST00000479586 Q6ZTK2 550 aa14.32□□□□□ -0.12
HMGN1-212ENST00000479586 C1orf87Q8N0U7 546 aa14.32□□□□□ -0.12
HMGN1-212ENST00000479586 PIP4P2Q8N4L2 257 aa14.32□□□□□ -0.12
HMGN1-212ENST00000479586 LRTOMTQ8WZ04 291 aa14.32□□□□□ -0.12
HMGN1-212ENST00000479586 SIRPDQ9H106 197 aa14.32□□□□□ -0.12
HMGN1-212ENST00000479586 IKZF5Q9H5V7 419 aa14.32□□□□□ -0.12
HMGN1-212ENST00000479586 TUBG2Q9NRH3 451 aa14.32□□□□□ -0.12
HMGN1-212ENST00000479586 STX18Q9P2W9 335 aaKnown RBP14.32□□□□□ -0.12
HMGN1-212ENST00000479586 CTSZQ9UBR2 303 aa14.32□□□□□ -0.12
HMGN1-212ENST00000479586 TMCC3Q9ULS5 477 aa14.32□□□□□ -0.12
HMGN1-212ENST00000479586 A0A1W2PPL8 197 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 TRAPPC13A5PLN9 417 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 TRPC5OSA6NMA1 111 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 F5H5P2 479 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 MLNRO43193 412 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 SCG5P05408 212 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 COX10Q12887 443 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 TOP3AQ13472 1001 aaPredicted RBP14.31□□□□□ -0.12
HMGN1-212ENST00000479586 METTL11BQ5VVY1 283 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 OR2T2Q6IF00 324 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 FOXL2NBQ6ZUU3 175 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 PFN4Q8NHR9 129 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 SLC7A6Q92536 515 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 PTP4A1Q93096 173 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 ITPKCQ96DU7 683 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 MPP4Q96JB8 637 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 PRSS27Q9BQR3 290 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 SEMA6AQ9H2E6 1030 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 TMEM38AQ9H6F2 299 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 VPREB3Q9UKI3 123 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 DNAH9Q9NYC9 4486 aa14.31□□□□□ -0.12
HMGN1-212ENST00000479586 GMNCA6NCL1 334 aa14.3□□□□□ -0.12
HMGN1-212ENST00000479586 DOK2O60496 412 aa14.3□□□□□ -0.12
HMGN1-212ENST00000479586 OR7A10O76100 309 aa14.3□□□□□ -0.12
HMGN1-212ENST00000479586 LIPFP07098 398 aa14.3□□□□□ -0.12
HMGN1-212ENST00000479586 COX5BP10606 129 aa14.3□□□□□ -0.12
HMGN1-212ENST00000479586 KITP10721 976 aa14.3□□□□□ -0.12
HMGN1-212ENST00000479586 RAC2P15153 192 aa14.3□□□□□ -0.12
HMGN1-212ENST00000479586 FUT1P19526 365 aa14.3□□□□□ -0.12
HMGN1-212ENST00000479586 CD276Q5ZPR3 534 aa14.3□□□□□ -0.12
HMGN1-212ENST00000479586 SLC30A8Q8IWU4 369 aa14.3□□□□□ -0.12
HMGN1-212ENST00000479586 OR8G5Q8NG78 346 aa14.3□□□□□ -0.12
HMGN1-212ENST00000479586 OR13G1Q8NGZ3 307 aa14.3□□□□□ -0.12
HMGN1-212ENST00000479586 ROPN1BQ9BZX4 212 aaPredicted RBP14.3□□□□□ -0.12
HMGN1-212ENST00000479586 MMADHCQ9H3L0 296 aaPredicted RBP14.3□□□□□ -0.12
HMGN1-212ENST00000479586 ROPN1Q9HAT0 212 aaPredicted RBP14.3□□□□□ -0.12
HMGN1-212ENST00000479586 EMC7Q9NPA0 242 aa14.3□□□□□ -0.12
HMGN1-212ENST00000479586 PTTG3PQ9NZH4 202 aa14.3□□□□□ -0.12
HMGN1-212ENST00000479586 FOXJ3Q9UPW0 622 aa14.3□□□□□ -0.12
HMGN1-212ENST00000479586 SIGLEC9Q9Y336 463 aa14.3□□□□□ -0.12
HMGN1-212ENST00000479586 C12orf71A8MTZ7 269 aa14.29□□□□□ -0.12
HMGN1-212ENST00000479586 NR2C1P13056 603 aa14.29□□□□□ -0.12
HMGN1-212ENST00000479586 MSR1P21757 451 aa14.29□□□□□ -0.12
HMGN1-212ENST00000479586 TGFBR2P37173 567 aa14.29□□□□□ -0.12
HMGN1-212ENST00000479586 NPY4RP50391 375 aa14.29□□□□□ -0.12
HMGN1-212ENST00000479586 LAPTM4AQ15012 233 aa14.29□□□□□ -0.12
HMGN1-212ENST00000479586 LRIF1Q5T3J3 769 aa14.29□□□□□ -0.12
HMGN1-212ENST00000479586 SLC35E4Q6ICL7 350 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms