RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 YIPF3Q9GZM5 350 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 RERGLQ9H628 205 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 VCX3AQ9NNX9 186 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 ACOT13Q9NPJ3 140 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 INPP5EQ9NRR6 644 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 GLRX2Q9NS18 164 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 PARPBPQ9NWS1 579 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 CLEC2DQ9UHP7 191 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 COPS3Q9UNS2 423 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 ZNF835Q9Y2P0 537 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 KLHDC2Q9Y2U9 406 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 LSM2Q9Y333 95 aaKnown RBP5.85□□□□□ -1.47
USP48-208ENST00000479177 LRRK2Q5S007 2527 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 RTTNQ86VV8 2226 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 DIDO1Q9BTC0 2240 aaKnown RBP5.84□□□□□ -1.47
USP48-208ENST00000479177 USP9XQ93008 2570 aaPredicted RBP5.84□□□□□ -1.47
USP48-208ENST00000479177 A0A1W2PPL8 197 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 A0A1W2PQL4 384 aaPredicted RBP5.84□□□□□ -1.47
USP48-208ENST00000479177 OR6C65A6NJZ3 312 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 PRR32B1ATL7 298 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 MYL12BO14950 172 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 SLC19A2O60779 497 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 MPZL1O95297 269 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 HLA-DQA2P01906 255 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 LCKP06239 509 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 HOXD4P09016 255 aaPredicted RBP5.84□□□□□ -1.47
USP48-208ENST00000479177 OR2T7P0C7T2 308 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 LAP3P28838 519 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 CDAP32320 146 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 CD79BP40259 229 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 RPL5P46777 297 aaKnown RBP5.84□□□□□ -1.47
USP48-208ENST00000479177 OR3A2P47893 321 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 ENTPD1P49961 510 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 SIRPAP78324 504 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 ROR2Q01974 943 aaKnown RBP5.84□□□□□ -1.47
USP48-208ENST00000479177 ZNF85Q03923 595 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 HSF2Q03933 536 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 GALEQ14376 348 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 STK11Q15831 433 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 MEP1BQ16820 701 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 PCK2Q16822 640 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 EIF2S3LQ2VIR3 472 aaKnown RBP5.84□□□□□ -1.47
USP48-208ENST00000479177 TSPO2Q5TGU0 170 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 UBE2UQ5VVX9 321 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 OTPQ5XKR4 325 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 OR2A2Q6IF42 318 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 TFAP2EQ6VUC0 442 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 SSX6Q7RTT6 188 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.84□□□□□ -1.47
USP48-208ENST00000479177 GCNT2Q8N0V5 402 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 RPRMLQ8N4K4 120 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 NANOGP1Q8N7R0 232 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 ZNF485Q8NCK3 441 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 OR10H4Q8NGA5 316 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 OR6N2Q8NGY6 317 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 OR2T27Q8NH04 317 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 OR52N1Q8NH53 320 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 CPT1CQ8TCG5 803 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 SMAP2Q8WU79 429 aaPredicted RBP5.84□□□□□ -1.47
USP48-208ENST00000479177 C11orf40Q8WZ69 217 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 HTRA1Q92743 480 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 NABP1Q96AH0 204 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 ZFP3Q96NJ6 502 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 MNTQ99583 582 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 TBX5Q99593 518 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 ALG8Q9BVK2 526 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 MND1Q9BWT6 205 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 TP63Q9H3D4 680 aaPredicted RBP5.84□□□□□ -1.47
USP48-208ENST00000479177 WDR76Q9H967 626 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 GPR35Q9HC97 309 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 EMC7Q9NPA0 242 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 B3GAT2Q9NPZ5 323 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 POLE4Q9NR33 117 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 SLC7A10Q9NS82 523 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 MALT1Q9UDY8 824 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 KCNG2Q9UJ96 466 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 ERGIC3Q9Y282 383 aa5.84□□□□□ -1.47
USP48-208ENST00000479177 ESPL1Q14674 2120 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 MYO7BQ6PIF6 2116 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 DOPEY1Q5JWR5 2465 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 DAPL1A0PJW8 107 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 ZNF587BE7ETH6 402 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 ZNF670-ZNF695F2Z2N8 137 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 RPL36A-HNRNPH2H7BZ11 118 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 ZNF593O00488 134 aaPredicted RBP5.83□□□□□ -1.48
USP48-208ENST00000479177 TNFSF13O75888 250 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 TOXO94900 526 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 INMTO95050 263 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 IGHV3-9P01782 118 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 AMY2AP04746 511 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 CRHP06850 196 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 SPARCP09486 303 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 TMIGD3P0DMS9 266 aaPredicted RBP5.83□□□□□ -1.48
USP48-208ENST00000479177 AMY2BP19961 511 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 ALOX5APP20292 161 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 MSR1P21757 451 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 CEACAM8P31997 349 aaPredicted RBP5.83□□□□□ -1.48
USP48-208ENST00000479177 TIMP3P35625 211 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 RPS27P42677 84 aaKnown RBP5.83□□□□□ -1.48
USP48-208ENST00000479177 ZNF84P51523 738 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms