RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 OSBPL10Q9BXB5 764 aa8.85□□□□□ -0.99
HDAC6-222ENST00000478095 TEX12Q9BXU0 123 aa8.85□□□□□ -0.99
HDAC6-222ENST00000478095 CXXC4Q9H2H0 198 aa8.85□□□□□ -0.99
HDAC6-222ENST00000478095 ZNF442Q9H7R0 627 aa8.85□□□□□ -0.99
HDAC6-222ENST00000478095 WDR76Q9H967 626 aa8.85□□□□□ -0.99
HDAC6-222ENST00000478095 HINT3Q9NQE9 182 aaKnown RBP8.85□□□□□ -0.99
HDAC6-222ENST00000478095 GDF2Q9UK05 429 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-222ENST00000478095 SPEF1Q9Y4P9 236 aa8.85□□□□□ -0.99
HDAC6-222ENST00000478095 COMMD3-BMI1R4GMX3 469 aa8.85□□□□□ -0.99
HDAC6-222ENST00000478095 SYNGR3O43761 229 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 PRKYO43930 277 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 SNAP29O95721 258 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 DBHP09172 617 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 SPARCP09486 303 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 ZNF823P16415 610 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 FMO3P31513 532 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 GLRXP35754 106 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 ATP5J2P56134 94 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 RPS7P62081 194 aaKnown RBP8.84□□□□□ -0.99
HDAC6-222ENST00000478095 SNRPD2P62316 118 aaKnown RBP8.84□□□□□ -0.99
HDAC6-222ENST00000478095 RAB35Q15286 201 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 SWI5Q1ZZU3 235 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 KLHL12Q53G59 568 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 LINC01590Q5TEZ4 76 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 RGS7BPQ6MZT1 257 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-222ENST00000478095 SLC18B1Q6NT16 456 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 RFPL4BQ6ZWI9 263 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 BCDIN3DQ7Z5W3 292 aaKnown RBP8.84□□□□□ -0.99
HDAC6-222ENST00000478095 LRP11Q86VZ4 500 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 KRTAP1-3Q8IUG1 177 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 CPOQ8IVL8 374 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 PQLC1Q8N2U9 271 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 CBR4Q8N4T8 237 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 WFDC11Q8NEX6 87 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 OR1J1Q8NGS3 322 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 OR2AJ1Q8NGZ0 328 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 OR1F12Q8NHA8 337 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 ABHD4Q8TB40 342 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 ZMYND19Q96E35 227 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-222ENST00000478095 RBM4BQ9BQ04 359 aaKnown RBP8.84□□□□□ -0.99
HDAC6-222ENST00000478095 WACQ9BTA9 647 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 MRPL37Q9BZE1 423 aaKnown RBP8.84□□□□□ -0.99
HDAC6-222ENST00000478095 GSX2Q9BZM3 304 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 GRIP2Q9C0E4 1043 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 PLK3Q9H4B4 646 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 ZNF701Q9NV72 531 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-222ENST00000478095 MYEF2Q9P2K5 600 aaKnown RBP8.84□□□□□ -0.99
HDAC6-222ENST00000478095 CYB5R1Q9UHQ9 305 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 NDRG4Q9ULP0 352 aaKnown RBP8.84□□□□□ -0.99
HDAC6-222ENST00000478095 CMAHPQ9Y471 501 aa8.84□□□□□ -0.99
HDAC6-222ENST00000478095 OR6C6A6NF89 314 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 ZAR1LA6NP61 321 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 VSTM5A8MXK1 200 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 B9A039 149 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 LILRA1O75019 489 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 ABHD16AO95870 558 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 CLPTM1O96005 669 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 NGFP01138 241 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 IGHV4-39P01824 125 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 ALPLP05186 524 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 RAD52P43351 418 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 UCP2P55851 309 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 RPS23P62266 143 aaKnown RBP8.83□□□□□ -1
HDAC6-222ENST00000478095 HIST1H3AP68431 136 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 MAD2L1BPQ15013 274 aaPredicted RBP8.83□□□□□ -1
HDAC6-222ENST00000478095 EFNB3Q15768 340 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 ALKBH6Q3KRA9 238 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 ZIK1Q3SY52 487 aaPredicted RBP8.83□□□□□ -1
HDAC6-222ENST00000478095 ELFN2Q5R3F8 820 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 HIST2H3PS2Q5TEC6 136 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 SLX4IPQ5VYV7 408 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 HIST2H3AQ71DI3 136 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 SPATC1Q76KD6 591 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 CXXC5Q7LFL8 322 aaKnown RBP8.83□□□□□ -1
HDAC6-222ENST00000478095 ERI1Q8IV48 349 aaKnown RBP8.83□□□□□ -1
HDAC6-222ENST00000478095 LRRC75A-AS1Q8N1F1 130 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 GJC3Q8NFK1 279 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 OR6N2Q8NGY6 317 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 MRPL24Q96A35 216 aaKnown RBP8.83□□□□□ -1
HDAC6-222ENST00000478095 TRMT61AQ96FX7 289 aaKnown RBP8.83□□□□□ -1
HDAC6-222ENST00000478095 MAP6Q96JE9 813 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 C4orf45Q96LM5 186 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 PITX2Q99697 317 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 GABARAPL3Q9BY60 117 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 DYNLRB1Q9NP97 96 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 EIF3KQ9UBQ5 218 aaKnown RBP8.83□□□□□ -1
HDAC6-222ENST00000478095 DUSP13Q9UII6 198 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 GRIP1Q9Y3R0 1128 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 OTOGQ6ZRI0 2925 aa8.83□□□□□ -1
HDAC6-222ENST00000478095 RAI1Q7Z5J4 1906 aaPredicted RBP8.82□□□□□ -1
HDAC6-222ENST00000478095 A0A1W2PPW3 197 aa8.82□□□□□ -1
HDAC6-222ENST00000478095 TMEM129A0AVI4 362 aa8.82□□□□□ -1
HDAC6-222ENST00000478095 ZNF593O00488 134 aaPredicted RBP8.82□□□□□ -1
HDAC6-222ENST00000478095 TLX2O43763 284 aaPredicted RBP8.82□□□□□ -1
HDAC6-222ENST00000478095 SELENOFO60613 162 aa8.82□□□□□ -1
HDAC6-222ENST00000478095 TMCC2O75069 709 aa8.82□□□□□ -1
HDAC6-222ENST00000478095 LY6HO94772 140 aa8.82□□□□□ -1
HDAC6-222ENST00000478095 GLCEO94923 617 aa8.82□□□□□ -1
HDAC6-222ENST00000478095 COX5BP10606 129 aa8.82□□□□□ -1
HDAC6-222ENST00000478095 BMP4P12644 408 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms