RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 RAET1LQ5VY80 246 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 FAM91A1Q658Y4 838 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 MFSD7Q6UXD7 560 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 CCBE1Q6UXH8 406 aaPredicted RBP3.57□□□□□ -1.84
VPS50-214ENST00000477935 TFAP2EQ6VUC0 442 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 H2AFVQ71UI9 128 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 SPATA19Q7Z5L4 167 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 C5orf24Q7Z6I8 188 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 PRUNE1Q86TP1 453 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 OR7G1Q8NGA0 311 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 OR4K17Q8NGC6 315 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 HGDQ93099 445 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 POP5Q969H6 163 aaKnown RBP3.57□□□□□ -1.84
VPS50-214ENST00000477935 ADIPOR1Q96A54 375 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 PPWD1Q96BP3 646 aaKnown RBP3.57□□□□□ -1.84
VPS50-214ENST00000477935 VPS39Q96JC1 886 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 TBCDQ9BTW9 1192 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 RPF2Q9H7B2 306 aaKnown RBP3.57□□□□□ -1.84
VPS50-214ENST00000477935 NT5DC2Q9H857 520 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 LPAR2Q9HBW0 351 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 TIGARQ9NQ88 270 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 SDHAF3Q9NRP4 125 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 PLEK2Q9NYT0 353 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 SLC2A6Q9UGQ3 507 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 NUP50Q9UKX7 468 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 PDE10AQ9Y233 779 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 IGLV4-3A0A075B6K6 122 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 TRAV34A0A0B4J273 112 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 hCG_38984A0A1B0GV85 526 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 ANKDD1BA6NHY2 528 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 C4orf51C9J302 202 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 PRSS46E5RG02 174 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 APOC4-APOC2K7ER74 178 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 KERAO60938 352 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 NIPSNAP2O75323 286 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 GPR75O95800 540 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 APOC2P02655 101 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 SLC35E2BP0CK96 405 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 SLC35E2P0CK97 266 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 ZNF17P17021 662 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 C4BPBP20851 252 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 CPN2P22792 545 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 OMGP23515 440 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 GPR183P32249 361 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 SLC1A3P43003 542 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 GPR6P46095 362 aaPredicted RBP3.56□□□□□ -1.84
VPS50-214ENST00000477935 SLC6A8P48029 635 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 CAPZA1P52907 286 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 AP1S2P56377 157 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 ERVK-16P61578 105 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 MRPS22P82650 360 aaKnown RBP3.56□□□□□ -1.84
VPS50-214ENST00000477935 KIAA0141Q14154 515 aaPredicted RBP3.56□□□□□ -1.84
VPS50-214ENST00000477935 ZNF146Q15072 292 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 PPP1R3AQ16821 1122 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 CASC10Q5T4H9 136 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 REP15Q6BDI9 236 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 DHRS11Q6UWP2 260 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 CES3Q6UWW8 571 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 TMIGD1Q6UXZ0 262 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 B3GLCTQ6Y288 498 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 ZNF841Q6ZN19 808 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 SLC43A2Q8N370 569 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 LINC00612Q8N6U2 182 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 ZNF615Q8N8J6 731 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 OR10D3Q8NH80 312 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 CLDND2Q8NHS1 167 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 CTNNBL1Q8WYA6 563 aaPredicted RBP3.56□□□□□ -1.84
VPS50-214ENST00000477935 C22orf15Q8WYQ4 148 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 NEIL2Q969S2 332 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 RBMXL1Q96E39 390 aaKnown RBP3.56□□□□□ -1.84
VPS50-214ENST00000477935 C1orf147Q96MC9 270 aaPredicted RBP3.56□□□□□ -1.84
VPS50-214ENST00000477935 RAB3IPQ96QF0 476 aaPredicted RBP3.56□□□□□ -1.84
VPS50-214ENST00000477935 ATF6BQ99941 703 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 CHCHD5Q9BSY4 110 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 AICDAQ9GZX7 198 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 TSPY26PQ9H489 355 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 IARS2Q9NSE4 1012 aaKnown RBP3.56□□□□□ -1.84
VPS50-214ENST00000477935 MRGBPQ9NV56 204 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 DHRS7Q9Y394 339 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 ARFGEF3Q5TH69 2177 aa3.56□□□□□ -1.84
VPS50-214ENST00000477935 TRAV18A0A075B6X5 111 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 PPIAL4EA0A075B759 164 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 PPIAL4CA0A0B4J2A2 164 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 A0A0G2JN53 185 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 IQCMA0A1B0GVH7 501 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 C5orf52A6NGY3 159 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 NKX6-3A6NJ46 265 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 PPIAL4DF5H284 164 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 M0R1B8 84 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 AP3B1O00203 1094 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 SELENOFO60613 162 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 FCGR3BO75015 233 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 UGT2B11O75310 529 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 LYZL6O75951 148 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 SCELO95171 688 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 MPZL1O95297 269 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 CLPSP04118 112 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 PPIAL4FP0DN26 164 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 FOLR2P14207 255 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 COX5AP20674 150 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms