RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 OR4M2Q8NGB6 313 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 NANPQ8TBE9 248 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 UBLCP1Q8WVY7 318 aaPredicted RBP3.84□□□□□ -1.79
CKS1B-207ENST00000477676 TMEM54Q969K7 222 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 MAL2Q969L2 176 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 LRR1Q96L50 414 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 SH3GL3Q99963 347 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF416Q9BWM5 594 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 NUF2Q9BZD4 464 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 SLC52A3Q9NQ40 469 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 HINT3Q9NQE9 182 aaKnown RBP3.84□□□□□ -1.79
CKS1B-207ENST00000477676 AIG1Q9NVV5 245 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 LGALS13Q9UHV8 139 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 HAO1Q9UJM8 370 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 SLC13A4Q9UKG4 626 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 RYR2Q92736 4967 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 CSMD3Q7Z407 3707 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 EPPK1P58107 5090 aaKnown RBP3.83□□□□□ -1.8
CKS1B-207ENST00000477676 TRAV36DV7A0A075B6V5 113 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 IGHV3OR16-10A0A075B7F0 116 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 A0A096LPI6 279 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 IGHV1-69-2A0A0G2JMI3 117 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 MDFIC2A0A1B0GVS7 189 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 A0A1W2PPW3 197 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 ZSCAN5BA6NJL1 495 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 J3QLI3 93 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 PLPP3O14495 311 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 TM9SF1O15321 606 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 MGRN1O60291 552 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 BCL10O95999 233 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 IGHV1-46P01743 117 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 IGHV3-13P01766 116 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 IGHV2-70P01814 119 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 MT-ND5P03915 603 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 THY1P04216 161 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 MMP7P09237 267 aaPredicted RBP3.83□□□□□ -1.8
CKS1B-207ENST00000477676 OR8G3PP0DMU2 310 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 NCF2P19878 526 aaPredicted RBP3.83□□□□□ -1.8
CKS1B-207ENST00000477676 CD80P33681 288 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 WNT5AP41221 380 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 MMP15P51511 669 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 CLNS1AP54105 237 aaKnown RBP3.83□□□□□ -1.8
CKS1B-207ENST00000477676 DSTNP60981 165 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 ABCE1P61221 599 aaKnown RBP3.83□□□□□ -1.8
CKS1B-207ENST00000477676 RPS16P62249 146 aaKnown RBP3.83□□□□□ -1.8
CKS1B-207ENST00000477676 C1DQ13901 141 aaKnown RBP3.83□□□□□ -1.8
CKS1B-207ENST00000477676 SLC9A3R2Q15599 337 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 TSTQ16762 297 aaKnown RBP3.83□□□□□ -1.8
CKS1B-207ENST00000477676 FAM69AQ5T7M9 428 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 INTS11Q5TA45 600 aaKnown RBP3.83□□□□□ -1.8
CKS1B-207ENST00000477676 RGS7BPQ6MZT1 257 aaPredicted RBP3.83□□□□□ -1.8
CKS1B-207ENST00000477676 Q6ZWC4 215 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 MSRB3Q8IXL7 192 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 ZNF101Q8IZC7 436 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 SLC22A24Q8N4F4 322 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 LSMEM1Q8N8F7 131 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 ADPRHL1Q8NDY3 354 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 MNS1Q8NEH6 495 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 SLC30A7Q8NEW0 376 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 OR9I1Q8NGQ6 314 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 SYNPRQ8TBG9 265 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 GEMIN6Q8WXD5 167 aaKnown RBP3.83□□□□□ -1.8
CKS1B-207ENST00000477676 SLC38A4Q969I6 547 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 ZIM3Q96PE6 472 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 OR52E6Q96RD3 313 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 PANX1Q96RD7 426 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 C1orf43Q9BWL3 253 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 SLITRK2Q9H156 845 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 WDR55Q9H6Y2 383 aaPredicted RBP3.83□□□□□ -1.8
CKS1B-207ENST00000477676 MEAF6Q9HAF1 191 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 TPT1P8Q9HAU6 139 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 MOV10Q9HCE1 1003 aaKnown RBP3.83□□□□□ -1.8
CKS1B-207ENST00000477676 BCL2L10Q9HD36 194 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 TCF7L2Q9NQB0 619 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 DDX28Q9NUL7 540 aaKnown RBP3.83□□□□□ -1.8
CKS1B-207ENST00000477676 TMEM38BQ9NVV0 291 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 NKIRAS2Q9NYR9 191 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 PLEK2Q9NYT0 353 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 SLC7A8Q9UHI5 535 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 KLHL21Q9UJP4 597 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 ZNF346Q9UL40 294 aaKnown RBP3.83□□□□□ -1.8
CKS1B-207ENST00000477676 POFUT2Q9Y2G5 429 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 RAP2CQ9Y3L5 183 aa3.83□□□□□ -1.8
CKS1B-207ENST00000477676 PLECQ15149 4684 aaKnown RBP3.82□□□□□ -1.8
CKS1B-207ENST00000477676 LOC100509620A0A075B734 347 aa3.82□□□□□ -1.8
CKS1B-207ENST00000477676 PPIAL4EA0A075B759 164 aa3.82□□□□□ -1.8
CKS1B-207ENST00000477676 IGKV1D-43A0A0B4J1Z2 117 aa3.82□□□□□ -1.8
CKS1B-207ENST00000477676 PPIAL4CA0A0B4J2A2 164 aa3.82□□□□□ -1.8
CKS1B-207ENST00000477676 A0A0B4J2E0 115 aa3.82□□□□□ -1.8
CKS1B-207ENST00000477676 A0A0G2JPF8 293 aa3.82□□□□□ -1.8
CKS1B-207ENST00000477676 A0A1B0GX12 115 aa3.82□□□□□ -1.8
CKS1B-207ENST00000477676 HNRNPCL2B2RXH8 293 aa3.82□□□□□ -1.8
CKS1B-207ENST00000477676 HNRNPCL3B7ZW38 293 aa3.82□□□□□ -1.8
CKS1B-207ENST00000477676 CLDN25C9JDP6 229 aa3.82□□□□□ -1.8
CKS1B-207ENST00000477676 C11orf98E9PRG8 122 aa3.82□□□□□ -1.8
CKS1B-207ENST00000477676 F5H0A9 414 aaPredicted RBP3.82□□□□□ -1.8
CKS1B-207ENST00000477676 PPIAL4DF5H284 164 aa3.82□□□□□ -1.8
CKS1B-207ENST00000477676 J3KRW8 73 aa3.82□□□□□ -1.8
CKS1B-207ENST00000477676 RFXANKO14593 260 aa3.82□□□□□ -1.8
CKS1B-207ENST00000477676 HNRNPCL1O60812 293 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms