RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 MT-ND5P03915 603 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 RPN2P04844 631 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 UCHL1P09936 223 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 MAOAP21397 527 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 HSD3B2P26439 372 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 HSD11B1P28845 292 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 KIR2DL1P43626 348 aaPredicted RBP11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 RGS8P57771 180 aaPredicted RBP11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 ARF6P62330 175 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 CDK3Q00526 305 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 FBXO42Q6P3S6 717 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 TNFAIP8L2Q6P589 184 aaPredicted RBP11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 KIRREL2Q6UWL6 708 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 BTNL3Q6UXE8 466 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 UNQ6126/PRO20091Q6UXV3 157 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 ZNF547Q8IVP9 402 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 TDHQ8IZJ6 230 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 C11orf42Q8N5U0 333 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 OR51G2Q8NGK0 314 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 ZNF671Q8TAW3 534 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 TMED6Q8WW62 240 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 KCNE4Q8WWG9 221 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 HAS2Q92819 552 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 RNF2Q99496 336 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 VPS25Q9BRG1 176 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 SRMSQ9H3Y6 488 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 TRAV1-2A0A0B4J238 106 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 A0A1W2PP55 124 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 ZNF705GA8MUZ8 300 aaPredicted RBP11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 K7EQS6 105 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 ACOT7O00154 380 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 PLPP2O43688 288 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 GCM2O75603 506 aaPredicted RBP11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 GOSR1O95249 250 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 IFNA21P01568 189 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 IGHA1P01876 353 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 MELTFP08582 738 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 OR12D1P0DN82 309 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 IGFALSP35858 605 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 SLC6A9P48067 706 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 SEC13P55735 322 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 TAS2R38P59533 333 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 RPS21P63220 83 aaKnown RBP11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 DLX2Q07687 328 aaPredicted RBP11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 SLC25A35Q3KQZ1 300 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 TMPRSS11BQ86T26 416 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 SECTM1Q8WVN6 248 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 PPCDCQ96CD2 204 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 RCC1LQ96I51 464 aaKnown RBP11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 SAMD8Q96LT4 415 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 SLITRK2Q9H156 845 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 NUMA1Q14980 2115 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 A0A087WWC5 75 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 ELOA3DA6NLF2 546 aaPredicted RBP11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 FAAHO00519 579 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 SOX14O95416 240 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 RABIFP47224 123 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 FGF8P55075 233 aaPredicted RBP11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 PAX5Q02548 391 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 SYPL1Q16563 259 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 TMEM241Q24JQ0 296 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 RNF151Q2KHN1 245 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 CCSMST1Q4G0I0 132 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 BEX5Q5H9J7 111 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 PRSS57Q6UWY2 283 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 CD300LDQ6UXZ3 194 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 KMT5CQ86Y97 462 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 GLB1L2Q8IW92 636 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 PAQR4Q8N4S7 273 aaPredicted RBP11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 OR4E2Q8NGC2 313 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 HMGB4Q8WW32 186 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 SYT3Q9BQG1 590 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 WWTR1Q9GZV5 400 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 APMAPQ9HDC9 416 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 PRM3Q9NNZ6 103 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 PHPT1Q9NRX4 125 aaPredicted RBP11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 VPS29Q9UBQ0 182 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 DKKL1Q9UK85 242 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 FOXJ3Q9UPW0 622 aa11.44□□□□□ -0.58
RTFDC1-207ENST00000477573 ANTXRLA6NF34 631 aa11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 J3QW42 95 aa11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 TXNDC12O95881 172 aa11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 IGHEP01854 428 aa11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 NAA10P41227 235 aaPredicted RBP11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 OR1E2P47887 323 aa11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 PDX1P52945 283 aa11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 TAS2R19P59542 299 aa11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 PRAMEF14Q5SWL7 426 aa11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 ZNF322Q6U7Q0 402 aaPredicted RBP11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 ZNF621Q6ZSS3 439 aa11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 MYPOPQ86VE0 399 aaPredicted RBP11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 FRMD1Q8N878 549 aa11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 LYPD6BQ8NI32 183 aa11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 ZNF480Q8WV37 535 aa11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 SPRYD4Q8WW59 207 aaPredicted RBP11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 SMIM12Q96EX1 92 aa11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 GABRG3Q99928 467 aa11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 SGK2Q9HBY8 427 aa11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 ZNF337Q9Y3M9 751 aa11.43□□□□□ -0.58
RTFDC1-207ENST00000477573 NUP214P35658 2090 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms