RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 CPNE2Q96FN4 548 aaPredicted RBP13.74□□□□□ -0.21
CLSTN1-205ENST00000477264 PTCHD1Q96NR3 888 aa13.74□□□□□ -0.21
CLSTN1-205ENST00000477264 CLCC1Q96S66 551 aa13.74□□□□□ -0.21
CLSTN1-205ENST00000477264 INSM2Q96T92 566 aaPredicted RBP13.74□□□□□ -0.21
CLSTN1-205ENST00000477264 PARP11Q9NR21 331 aa13.74□□□□□ -0.21
CLSTN1-205ENST00000477264 FBXO34Q9NWN3 711 aa13.74□□□□□ -0.21
CLSTN1-205ENST00000477264 DNAJB11Q9UBS4 358 aa13.74□□□□□ -0.21
CLSTN1-205ENST00000477264 CACFD1Q9UGQ2 172 aa13.74□□□□□ -0.21
CLSTN1-205ENST00000477264 MMP17Q9ULZ9 603 aa13.74□□□□□ -0.21
CLSTN1-205ENST00000477264 FAM96BQ9Y3D0 163 aa13.74□□□□□ -0.21
CLSTN1-205ENST00000477264 A0A087WV48 116 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 TBC1D3DA0A087WVF3 549 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 TBC1D3IA0A087WXS9 549 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 C5orf51A6NDU8 294 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 TBC1D3LB9A6J9 549 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 PCCBP05166 539 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 CD2P06729 351 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 TBC1D3HP0C7X1 549 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 PET100P0DJ07 73 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 CD37P11049 281 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 SNRPNP63162 240 aaKnown RBP13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 PMPCAQ10713 525 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 TRMT12Q53H54 448 aaKnown RBP13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 ACER2Q5QJU3 275 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 TBC1D3CQ6IPX1 549 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 ZNF585AQ6P3V2 769 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 FIGNL1Q6PIW4 674 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 TBC1D3Q8IZP1 549 aaPredicted RBP13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 COMMD1Q8N668 190 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 SULT4A1Q9BR01 284 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 HRH4Q9H3N8 390 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 XKR8Q9H6D3 395 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 CKLFQ9UBR5 152 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 KLK13Q9UKR3 277 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 A0A087WUJ7 227 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 EEF1E1-BLOC1S5C9J1V9 151 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 SMAD9O15198 467 aaKnown RBP13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 TXNL1O43396 289 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 NKX2-2O95096 273 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 OR8U8P0C7N1 319 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 ZNF888P0CJ79 500 aaPredicted RBP13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 RAB6AP20340 208 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 ZNF10P21506 573 aaPredicted RBP13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 HTR2CP28335 458 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 ADPRHP54922 357 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 TFF2Q03403 129 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 DMWDQ09019 674 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 EMC4Q5J8M3 183 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 OR2B11Q5JQS5 317 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 PRSS54Q6PEW0 395 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 TMEM92Q6UXU6 159 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 ZNF511Q8NB15 262 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 OR10AC1Q8NH08 325 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 MRGPRX1Q96LB2 322 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 ELF4Q99607 663 aaPredicted RBP13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 CA14Q9ULX7 337 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 FARSAQ9Y285 508 aaKnown RBP13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 SLC22A7Q9Y694 548 aa13.73□□□□□ -0.21
CLSTN1-205ENST00000477264 TCRBV21S2A2A0A5A6 115 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 MEGF11A6BM72 1044 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 RHPN2P1A8MT19 583 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 FAM157AC9JC47 383 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 ST8SIA5O15466 376 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 STK17BO94768 372 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 TXNDC12O95881 172 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 FCGR3AP08637 254 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 AQP2P41181 271 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 KIR3DL2P43630 455 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 SULT1A2P50226 295 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 RBM39Q14498 530 aaKnown RBP13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 ELAVL1Q15717 326 aaKnown RBP13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 KIRREL2Q6UWL6 708 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 BTNL8Q6UX41 500 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 C1QL4Q86Z23 238 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 LILRB2Q8N423 598 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 ZSCAN4Q8NAM6 433 aaPredicted RBP13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 HOXB13Q92826 284 aaPredicted RBP13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 FAM131CQ96AQ9 280 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 KIRREL1Q96J84 757 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 PCOLCE2Q9UKZ9 415 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 SCN2AQ99250 2005 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 A0A1W2PQU0 124 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 URADA6NGE7 173 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 SHISA7A6NL88 538 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 B3GALT2O43825 422 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 NDUFS6O75380 124 aaKnown RBP13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 ZNF28P17035 718 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 RAB5AP20339 215 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 AVPR2P30518 371 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 GABRA3P34903 492 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 SERPINF1P36955 418 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 HGFACQ04756 655 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 MAMDC2Q7Z304 686 aaPredicted RBP13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 PRSS35Q8N3Z0 413 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 OR52E1Q8NGJ3 308 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 ZDHHC12Q96GR4 267 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 TIMM29Q9BSF4 260 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 RNF126Q9BV68 326 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 LAT2Q9GZY6 243 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 RPS10P5Q9NQ39 176 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms