RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 KLHL21Q9UJP4 597 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 OAZ3Q9UMX2 235 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 SMIM31A0A1B0GVY4 71 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 OR6C6A6NF89 314 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 TRIM64A6NGJ6 449 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 TRIM64BA6NI03 449 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 B9A039 149 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 M0R129 80 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 SURF4O15260 269 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 TMCC2O75069 709 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 CLPTM1O96005 669 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 PTHP01270 115 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 HLA-DQA2P01906 255 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 DBHP09172 617 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 FCGR1AP12314 374 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 POLR2IP36954 125 aaKnown RBP8.33□□□□□ -1.08
HDAC3-208ENST00000476739 HTR5AP47898 357 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 GDI2P50395 445 aaKnown RBP8.33□□□□□ -1.08
HDAC3-208ENST00000476739 SLC25A1P53007 311 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 CRISP1P54107 249 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 UCP2P55851 309 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 HIST1H3AP68431 136 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 GLO1Q04760 184 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 SCRN3Q0VDG4 424 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 PTGES3Q15185 160 aaKnown RBP8.33□□□□□ -1.08
HDAC3-208ENST00000476739 SPATA46Q5T0L3 261 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 HIST2H3PS2Q5TEC6 136 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 SHEQ5VZ18 495 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 SLC18B1Q6NT16 456 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 RFPL4BQ6ZWI9 263 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 HIST2H3AQ71DI3 136 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 ZDHHC13Q8IUH4 622 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 CROCCP3Q8IVE0 287 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 CIARTQ8N365 385 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-208ENST00000476739 PROKR2Q8NFJ6 384 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 OR10S1Q8NGN2 331 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 OR1J2Q8NGS2 313 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 OR2T4Q8NH00 348 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 TRMT61AQ96FX7 289 aaKnown RBP8.33□□□□□ -1.08
HDAC3-208ENST00000476739 CENPNQ96H22 339 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-208ENST00000476739 Q96MF0 132 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 SORCS2Q96PQ0 1159 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 TMUB1Q9BVT8 246 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 C1orf198Q9H425 327 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 POFUT1Q9H488 388 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 SLC25A19Q9HC21 320 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 PNRC2Q9NPJ4 139 aaKnown RBP8.33□□□□□ -1.08
HDAC3-208ENST00000476739 HINT3Q9NQE9 182 aaKnown RBP8.33□□□□□ -1.08
HDAC3-208ENST00000476739 KRT84Q9NSB2 600 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 PLEK2Q9NYT0 353 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 TMEFF2Q9UIK5 374 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-208ENST00000476739 POLR1DQ9Y2S0 133 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 CMAHPQ9Y471 501 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 SPEF1Q9Y4P9 236 aa8.33□□□□□ -1.08
HDAC3-208ENST00000476739 MED13LQ71F56 2210 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 RIIAD1A6NNX1 92 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 H7C417 338 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 SSX4O60224 188 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 IFNGP01579 166 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 LCKP06239 509 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 ZNF3P17036 446 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 ANOS1P23352 680 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 PCSK6P29122 969 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 GSTT1P30711 240 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 ALDH3B1P43353 468 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 SNRPD2P62316 118 aaKnown RBP8.32□□□□□ -1.08
HDAC3-208ENST00000476739 PPP2R2BQ00005 443 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 LSAMPQ13449 338 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 MAD2L1BPQ15013 274 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-208ENST00000476739 RAB35Q15286 201 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 RSPO1Q2MKA7 263 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-208ENST00000476739 ALKBH6Q3KRA9 238 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 RGS7BPQ6MZT1 257 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-208ENST00000476739 PLBD1Q6P4A8 553 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 PRSS57Q6UWY2 283 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 CPOQ8IVL8 374 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 PARP8Q8N3A8 854 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 BBS1Q8NFJ9 593 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 GJC3Q8NFK1 279 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 OR10H5Q8NGA6 315 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 OR1J1Q8NGS3 322 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 OR6K6Q8NGW6 343 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 OR1F12Q8NHA8 337 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 SLC25A40Q8TBP6 338 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 OTULINQ96BN8 352 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 MAP6Q96JE9 813 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 C4orf45Q96LM5 186 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 CIB1Q99828 191 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 VRK1Q99986 396 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-208ENST00000476739 WACQ9BTA9 647 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 OSBPL10Q9BXB5 764 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 S100A14Q9HCY8 104 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 TVP23BQ9NYZ1 205 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 CYB5R1Q9UHQ9 305 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 DUSP13Q9UII6 198 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 F8P00451 2351 aa8.32□□□□□ -1.08
HDAC3-208ENST00000476739 CHD3Q12873 2000 aaKnown RBP8.31□□□□□ -1.08
HDAC3-208ENST00000476739 PRKYO43930 277 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 ICMTO60725 284 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 ADRA2AP08913 450 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms