RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 SLC35G6P0C7Q6 338 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 FGF5P12034 268 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 GLB1P16278 677 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 CSNK2A2P19784 350 aaPredicted RBP3.75□□□□□ -1.81
CD55-208ENST00000476590 TIMP3P35625 211 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 CEACAM3P40198 252 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 VIPR2P41587 438 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 PDX1P52945 283 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 GAS1P54826 345 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 GEMP55040 296 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 SESN2P58004 480 aaPredicted RBP3.75□□□□□ -1.81
CD55-208ENST00000476590 RAB10P61026 200 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 UFM1P61960 85 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 YPEL5P62699 121 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 HERV-K104P63124 156 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 CDK5Q00535 292 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 ZNF763Q0D2J5 394 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 PRICKLE4Q2TBC4 344 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 TMEM249Q2WGJ8 235 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 ARHGAP11BQ3KRB8 267 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 EIPR1Q53HC9 387 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 DCST1Q5T197 706 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 HBMQ6B0K9 141 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 SFRP4Q6FHJ7 346 aaPredicted RBP3.75□□□□□ -1.81
CD55-208ENST00000476590 RTL6Q6ICC9 239 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 FAM71E1Q6IPT2 247 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 ZNF549Q6P9A3 640 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 SLC27A1Q6PCB7 646 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 TMPPEQ6ZT21 453 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 MTSS1LQ765P7 747 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 WFDC8Q8IUA0 241 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 D2HGDHQ8N465 521 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 CCDC71LQ8N9Z2 235 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 ST6GALNAC3Q8NDV1 305 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 PLPP5Q8NEB5 264 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 OR13H1Q8NG92 308 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 OR4K2Q8NGD2 314 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 OR52E1Q8NGJ3 308 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 OR2I1PQ8NGU4 316 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 OR52J3Q8NH60 311 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 RAB1CQ92928 201 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 RAB39BQ96DA2 213 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 TMEM176AQ96HP8 235 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 SNX22Q96L94 193 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 MICU1Q9BPX6 476 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 PBDC1Q9BVG4 233 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 HDAC8Q9BY41 377 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 RHOJQ9H4E5 214 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 ZNF552Q9H707 407 aaPredicted RBP3.75□□□□□ -1.81
CD55-208ENST00000476590 GBA2Q9HCG7 927 aaPredicted RBP3.75□□□□□ -1.81
CD55-208ENST00000476590 HRASLSQ9HDD0 168 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 SEMA4GQ9NTN9 838 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 MRPL22Q9NWU5 206 aaKnown RBP3.75□□□□□ -1.81
CD55-208ENST00000476590 TMEM161AQ9NX61 479 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 ELOVL5Q9NYP7 299 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 VPS29Q9UBQ0 182 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 UPB1Q9UBR1 384 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 KCNK6Q9Y257 313 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 RPL36Q9Y3U8 105 aaKnown RBP3.75□□□□□ -1.81
CD55-208ENST00000476590 LRP12Q9Y561 859 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 NME7Q9Y5B8 376 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 DNAJC15Q9Y5T4 150 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 SNX10Q9Y5X0 201 aa3.75□□□□□ -1.81
CD55-208ENST00000476590 ARFGEF1Q9Y6D6 1849 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 GBF1Q92538 1859 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 TRIP11Q15643 1979 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 TVP23AA6NH52 213 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 F8VVB4 439 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 F8VWA3 439 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 AZIN1O14977 448 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 KLK10O43240 276 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 XRCC3O43542 346 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 SPRY1O43609 319 aaPredicted RBP3.74□□□□□ -1.81
CD55-208ENST00000476590 TNFSF13O75888 250 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 HLA-DPB1P04440 258 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 FAM157CP0CG43 387 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 CALCBP10092 127 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 LIPCP11150 499 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 FOLR1P15328 257 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 MSR1P21757 451 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 CD1CP29017 333 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 DLSTP36957 453 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 CASRP41180 1078 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 BACE1P56817 501 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 CRADDP78560 199 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 RHOGP84095 191 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 H3F3AP84243 136 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 DGCR2P98153 550 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 PAX2Q02962 417 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 ST3GAL3Q11203 375 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 HYAL1Q12794 435 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 AIMP2Q13155 320 aaKnown RBP3.74□□□□□ -1.81
CD55-208ENST00000476590 CBFBQ13951 182 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 ZNF234Q14588 700 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 SNAI3Q3KNW1 292 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 MPPE1Q53F39 396 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 XKR6Q5GH73 641 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 TECRLQ5HYJ1 363 aa3.74□□□□□ -1.81
CD55-208ENST00000476590 COA6Q5JTJ3 125 aaKnown RBP3.74□□□□□ -1.81
CD55-208ENST00000476590 PLEKHS1Q5SXH7 462 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms