RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 TRUB1Q8WWH5 349 aaKnown RBP14.59□□□□□ -0.07
SCAF11-206ENST00000474828 MAP6Q96JE9 813 aa14.59□□□□□ -0.07
SCAF11-206ENST00000474828 DCLRE1CQ96SD1 692 aaKnown RBP14.59□□□□□ -0.07
SCAF11-206ENST00000474828 PITX2Q99697 317 aa14.59□□□□□ -0.07
SCAF11-206ENST00000474828 CCL19Q99731 98 aa14.59□□□□□ -0.07
SCAF11-206ENST00000474828 PLK3Q9H4B4 646 aa14.59□□□□□ -0.07
SCAF11-206ENST00000474828 DCLRE1BQ9H816 532 aa14.59□□□□□ -0.07
SCAF11-206ENST00000474828 WDR76Q9H967 626 aa14.59□□□□□ -0.07
SCAF11-206ENST00000474828 TUBG2Q9NRH3 451 aa14.59□□□□□ -0.07
SCAF11-206ENST00000474828 TBCCD1Q9NVR7 557 aa14.59□□□□□ -0.07
SCAF11-206ENST00000474828 GDF2Q9UK05 429 aaPredicted RBP14.59□□□□□ -0.07
SCAF11-206ENST00000474828 FBXO9Q9UK97 447 aaPredicted RBP14.59□□□□□ -0.07
SCAF11-206ENST00000474828 VPS13CQ709C8 3753 aa14.59□□□□□ -0.07
SCAF11-206ENST00000474828 HEATR1Q9H583 2144 aaKnown RBP14.59□□□□□ -0.07
SCAF11-206ENST00000474828 CCDC168Q8NDH2 2452 aa14.58□□□□□ -0.07
SCAF11-206ENST00000474828 IGLV3-9A0A075B6K5 115 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 B9A039 149 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 H3BSA7 217 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 H7C417 338 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 DOK2O60496 412 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 CCL2P13500 99 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 ZNF250P15622 560 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 ZNF823P16415 610 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 GSTT1P30711 240 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 SERPINF1P36955 418 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 RAD52P43351 418 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 ENTPD1P49961 510 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 GDI2P50395 445 aaKnown RBP14.58□□□□□ -0.08
SCAF11-206ENST00000474828 RPS23P62266 143 aaKnown RBP14.58□□□□□ -0.08
SCAF11-206ENST00000474828 ECH1Q13011 328 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 SNTB2Q13425 540 aaKnown RBP14.58□□□□□ -0.08
SCAF11-206ENST00000474828 GGTLC2Q14390 218 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 NXNL2Q5VZ03 156 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 COLCA1Q6ZS62 124 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 FBXL14Q8N1E6 418 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 PACRGLQ8N7B6 248 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 BBS1Q8NFJ9 593 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 OR10H5Q8NGA6 315 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 OR8J1Q8NGP2 316 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 EME1Q96AY2 570 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 MBOAT4Q96T53 435 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 TEAD3Q99594 435 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 DOK1Q99704 481 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 BCL2L14Q9BZR8 327 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 CDH20Q9HBT6 801 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 HAO2Q9NYQ3 351 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 PLEK2Q9NYT0 353 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 LAMP3Q9UQV4 416 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 DSCAMO60469 2012 aa14.58□□□□□ -0.08
SCAF11-206ENST00000474828 C5orf49A4QMS7 147 aa14.57□□□□□ -0.08
SCAF11-206ENST00000474828 CCDC182A6NF36 153 aa14.57□□□□□ -0.08
SCAF11-206ENST00000474828 ERICH4A6NGS2 130 aa14.57□□□□□ -0.08
SCAF11-206ENST00000474828 TVP23AA6NH52 213 aa14.57□□□□□ -0.08
SCAF11-206ENST00000474828 ZNF593O00488 134 aaPredicted RBP14.57□□□□□ -0.08
SCAF11-206ENST00000474828 SLC16A6O15403 523 aa14.57□□□□□ -0.08
SCAF11-206ENST00000474828 GPRIN2O60269 458 aa14.57□□□□□ -0.08
SCAF11-206ENST00000474828 SMPD2O60906 423 aa14.57□□□□□ -0.08
SCAF11-206ENST00000474828 BAG2O95816 211 aa14.57□□□□□ -0.08
SCAF11-206ENST00000474828 OR4A8P0C604 315 aa14.57□□□□□ -0.08
SCAF11-206ENST00000474828 ADAM8P78325 824 aa14.57□□□□□ -0.08
SCAF11-206ENST00000474828 GALK2Q01415 458 aa14.57□□□□□ -0.08
SCAF11-206ENST00000474828 KRT80Q6KB66 452 aa14.57□□□□□ -0.08
SCAF11-206ENST00000474828 CORO6Q6QEF8 472 aa14.57□□□□□ -0.08
SCAF11-206ENST00000474828 KRTAP1-3Q8IUG1 177 aa14.57□□□□□ -0.08
SCAF11-206ENST00000474828 ZNF101Q8IZC7 436 aa14.57□□□□□ -0.08
SCAF11-206ENST00000474828 MRPL24Q96A35 216 aaKnown RBP14.57□□□□□ -0.08
SCAF11-206ENST00000474828 PLEKHA8Q96JA3 519 aa14.57□□□□□ -0.08
SCAF11-206ENST00000474828 RIBC2Q9H4K1 309 aa14.57□□□□□ -0.08
SCAF11-206ENST00000474828 CXorf56Q9H5V9 222 aa14.57□□□□□ -0.08
SCAF11-206ENST00000474828 ORC6Q9Y5N6 252 aa14.57□□□□□ -0.08
SCAF11-206ENST00000474828 VSTM5A8MXK1 200 aa14.56□□□□□ -0.08
SCAF11-206ENST00000474828 TLX2O43763 284 aaPredicted RBP14.56□□□□□ -0.08
SCAF11-206ENST00000474828 HLA-DQA2P01906 255 aa14.56□□□□□ -0.08
SCAF11-206ENST00000474828 HTR5AP47898 357 aa14.56□□□□□ -0.08
SCAF11-206ENST00000474828 OGFRL1Q5TC84 451 aaPredicted RBP14.56□□□□□ -0.08
SCAF11-206ENST00000474828 PRSS57Q6UWY2 283 aa14.56□□□□□ -0.08
SCAF11-206ENST00000474828 SPNS3Q6ZMD2 512 aa14.56□□□□□ -0.08
SCAF11-206ENST00000474828 TCEANCQ8N8B7 351 aa14.56□□□□□ -0.08
SCAF11-206ENST00000474828 OR6K6Q8NGW6 343 aa14.56□□□□□ -0.08
SCAF11-206ENST00000474828 OR2AJ1Q8NGZ0 328 aa14.56□□□□□ -0.08
SCAF11-206ENST00000474828 MARS2Q96GW9 593 aaKnown RBP14.56□□□□□ -0.08
SCAF11-206ENST00000474828 C4orf45Q96LM5 186 aa14.56□□□□□ -0.08
SCAF11-206ENST00000474828 INTS14Q96SY0 518 aa14.56□□□□□ -0.08
SCAF11-206ENST00000474828 CDADC1Q9BWV3 514 aa14.56□□□□□ -0.08
SCAF11-206ENST00000474828 OR51V1Q9H2C8 321 aa14.56□□□□□ -0.08
SCAF11-206ENST00000474828 TOR3AQ9H497 397 aa14.56□□□□□ -0.08
SCAF11-206ENST00000474828 CMAHPQ9Y471 501 aa14.56□□□□□ -0.08
SCAF11-206ENST00000474828 TEP1Q99973 2627 aaKnown RBP14.56□□□□□ -0.08
SCAF11-206ENST00000474828 MAP1AP78559 2803 aaPredicted RBP14.55□□□□□ -0.08
SCAF11-206ENST00000474828 SNRPGP62308 76 aaKnown RBP14.55□□□□□ -0.08
SCAF11-206ENST00000474828 TMED1Q13445 227 aa14.55□□□□□ -0.08
SCAF11-206ENST00000474828 APOFQ13790 326 aa14.55□□□□□ -0.08
SCAF11-206ENST00000474828 MBNL2Q5VZF2 373 aaKnown RBP14.55□□□□□ -0.08
SCAF11-206ENST00000474828 ARL9Q6T311 187 aa14.55□□□□□ -0.08
SCAF11-206ENST00000474828 UNQ6126/PRO20091Q6UXV3 157 aa14.55□□□□□ -0.08
SCAF11-206ENST00000474828 MEPCEQ7L2J0 689 aaKnown RBP14.55□□□□□ -0.08
SCAF11-206ENST00000474828 SHFQ7M4L6 423 aa14.55□□□□□ -0.08
SCAF11-206ENST00000474828 LINC00346Q8IVM7 164 aa14.55□□□□□ -0.08
SCAF11-206ENST00000474828 ZNF454Q8N9F8 522 aa14.55□□□□□ -0.08
SCAF11-206ENST00000474828 OTOSQ8NHW6 89 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms