RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 EMC9Q9Y3B6 208 aa9.44□□□□□ -0.9
SP140-208ENST00000473711 LRP12Q9Y561 859 aa9.44□□□□□ -0.9
SP140-208ENST00000473711 NBEAQ8NFP9 2946 aa9.44□□□□□ -0.9
SP140-208ENST00000473711 CELSR3Q9NYQ7 3312 aa9.44□□□□□ -0.9
SP140-208ENST00000473711 A0A1W2PPW3 197 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 MBD3L4A6NDZ8 208 aaPredicted RBP9.43□□□□□ -0.9
SP140-208ENST00000473711 MBD3L3A6NE82 208 aaPredicted RBP9.43□□□□□ -0.9
SP140-208ENST00000473711 FAM181BA6NEQ2 426 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 MBD3L5A6NJ08 208 aaPredicted RBP9.43□□□□□ -0.9
SP140-208ENST00000473711 FIGNL2A6NMB9 653 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 CST2P09228 141 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 PATE4P0C8F1 98 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 SFTPCP11686 197 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 GABRA5P31644 462 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 PTGER4P35408 488 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 KIR2DL2P43627 348 aaPredicted RBP9.43□□□□□ -0.9
SP140-208ENST00000473711 TGM4P49221 684 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 GDI2P50395 445 aaKnown RBP9.43□□□□□ -0.9
SP140-208ENST00000473711 PER3P56645 1201 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 NANOS3P60323 173 aaKnown RBP9.43□□□□□ -0.9
SP140-208ENST00000473711 FABP5Q01469 135 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 MRPL28Q13084 256 aaKnown RBP9.43□□□□□ -0.9
SP140-208ENST00000473711 DYNC1I2Q13409 638 aaKnown RBP9.43□□□□□ -0.9
SP140-208ENST00000473711 ALKBH1Q13686 389 aaKnown RBP9.43□□□□□ -0.9
SP140-208ENST00000473711 CDK5R1Q15078 307 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 GUSBP1Q15486 140 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 TIMM50Q3ZCQ8 353 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 CCDC58Q4VC31 144 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 FBXW9Q5XUX1 488 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 VWA1Q6PCB0 445 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 KLHL24Q6TFL4 600 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 ZNF813Q6ZN06 617 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 DOLPP1Q86YN1 238 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 SKA3Q8IX90 412 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 SLC22A24Q8N4F4 322 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 RPRMLQ8N4K4 120 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 MBD3L2Q8NHZ7 208 aaPredicted RBP9.43□□□□□ -0.9
SP140-208ENST00000473711 RNF133Q8WVZ7 376 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 HSD17B8Q92506 261 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 GHSRQ92847 366 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 FBXO17Q96EF6 278 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 TRMT61AQ96FX7 289 aaKnown RBP9.43□□□□□ -0.9
SP140-208ENST00000473711 BCL7BQ9BQE9 202 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 HDHD5Q9BXW7 423 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 FBXL3Q9UKT7 428 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 FAM215AQ9Y5M1 114 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 UNC79Q9P2D8 2635 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 PTPRQQ9UMZ3 2332 aa9.43□□□□□ -0.9
SP140-208ENST00000473711 A0A096LPE4 126 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 TRDV1A0A1B0GX56 115 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 A0A1W2PPZ6 126 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 PRRG2O14669 202 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 ZNF254O75437 659 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 TOXO94900 526 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 PNPP00491 289 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 HOXD4P09016 255 aaPredicted RBP9.42□□□□□ -0.9
SP140-208ENST00000473711 TMIGD3P0DMS9 266 aaPredicted RBP9.42□□□□□ -0.9
SP140-208ENST00000473711 CD8BP10966 210 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 PCSK6P29122 969 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 OPRL1P41146 370 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 HIST1H3AP68431 136 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 INSL4Q14641 139 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 STK11Q15831 433 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 CCDC92Q53HC0 331 aaPredicted RBP9.42□□□□□ -0.9
SP140-208ENST00000473711 HIST2H3PS2Q5TEC6 136 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 DEGS2Q6QHC5 323 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 TFAP2EQ6VUC0 442 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 GDPGP1Q6ZNW5 385 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 HIST2H3AQ71DI3 136 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 SLC16A14Q7RTX9 510 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 ABHD12BQ7Z5M8 362 aaPredicted RBP9.42□□□□□ -0.9
SP140-208ENST00000473711 BTLAQ7Z6A9 289 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 PRSS35Q8N3Z0 413 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 GJC3Q8NFK1 279 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 OR2G2Q8NGZ5 317 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 FGFBP3Q8TAT2 258 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 ABHD4Q8TB40 342 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 NDNFQ8TB73 568 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 PPP1R14AQ96A00 147 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 PDCD1LG2Q9BQ51 273 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 DCUN1D5Q9BTE7 237 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 KCNN2Q9H2S1 579 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 PNRC2Q9NPJ4 139 aaKnown RBP9.42□□□□□ -0.9
SP140-208ENST00000473711 TXNL4BQ9NX01 149 aaKnown RBP9.42□□□□□ -0.9
SP140-208ENST00000473711 FRRS1LQ9P0K9 344 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 GTF2A1LQ9UNN4 478 aa9.42□□□□□ -0.9
SP140-208ENST00000473711 PHF3Q92576 2039 aaKnown RBP9.42□□□□□ -0.9
SP140-208ENST00000473711 HSPB2A8KAH6 182 aa9.41□□□□□ -0.9
SP140-208ENST00000473711 ZNF878C9JN71 531 aa9.41□□□□□ -0.9
SP140-208ENST00000473711 GABRPO00591 440 aa9.41□□□□□ -0.9
SP140-208ENST00000473711 SLC22A1O15245 554 aa9.41□□□□□ -0.9
SP140-208ENST00000473711 RGS9O75916 674 aaPredicted RBP9.41□□□□□ -0.9
SP140-208ENST00000473711 FARS2O95363 451 aaKnown RBP9.41□□□□□ -0.9
SP140-208ENST00000473711 IL2RAP01589 272 aa9.41□□□□□ -0.9
SP140-208ENST00000473711 HLA-DPB1P04440 258 aa9.41□□□□□ -0.9
SP140-208ENST00000473711 CD1AP06126 327 aa9.41□□□□□ -0.9
SP140-208ENST00000473711 GLI4P10075 376 aa9.41□□□□□ -0.9
SP140-208ENST00000473711 ZNF32P17041 273 aa9.41□□□□□ -0.9
SP140-208ENST00000473711 CD53P19397 219 aa9.41□□□□□ -0.9
SP140-208ENST00000473711 HSD11B1P28845 292 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms