RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 RASD2Q96D21 266 aa16.69■□□□□ 0.26
COL9A3-210ENST00000472880 MYLK2Q9H1R3 596 aa16.69■□□□□ 0.26
COL9A3-210ENST00000472880 NMNAT1Q9HAN9 279 aaPredicted RBP16.69■□□□□ 0.26
COL9A3-210ENST00000472880 DCAF16Q9NXF7 216 aa16.69■□□□□ 0.26
COL9A3-210ENST00000472880 OPN4Q9UHM6 478 aa16.69■□□□□ 0.26
COL9A3-210ENST00000472880 ENPP4Q9Y6X5 453 aa16.69■□□□□ 0.26
COL9A3-210ENST00000472880 TMEM89A2RUT3 159 aa16.68■□□□□ 0.26
COL9A3-210ENST00000472880 NDUFAB1O14561 156 aa16.68■□□□□ 0.26
COL9A3-210ENST00000472880 SURF4O15260 269 aa16.68■□□□□ 0.26
COL9A3-210ENST00000472880 KHDRBS3O75525 346 aaKnown RBP16.68■□□□□ 0.26
COL9A3-210ENST00000472880 FPR2P25090 351 aa16.68■□□□□ 0.26
COL9A3-210ENST00000472880 HNRNPA0Q13151 305 aaKnown RBP16.68■□□□□ 0.26
COL9A3-210ENST00000472880 FGD3Q5JSP0 725 aa16.68■□□□□ 0.26
COL9A3-210ENST00000472880 GPR139Q6DWJ6 353 aa16.68■□□□□ 0.26
COL9A3-210ENST00000472880 C1orf94Q6P1W5 598 aa16.68■□□□□ 0.26
COL9A3-210ENST00000472880 SLC7A13Q8TCU3 470 aa16.68■□□□□ 0.26
COL9A3-210ENST00000472880 CMBLQ96DG6 245 aa16.68■□□□□ 0.26
COL9A3-210ENST00000472880 ZMYND19Q96E35 227 aaPredicted RBP16.68■□□□□ 0.26
COL9A3-210ENST00000472880 SAMD8Q96LT4 415 aa16.68■□□□□ 0.26
COL9A3-210ENST00000472880 KCTD14Q9BQ13 255 aaPredicted RBP16.68■□□□□ 0.26
COL9A3-210ENST00000472880 PLA2G12AQ9BZM1 189 aa16.68■□□□□ 0.26
COL9A3-210ENST00000472880 SYT4Q9H2B2 425 aa16.68■□□□□ 0.26
COL9A3-210ENST00000472880 EFCAB1Q9HAE3 211 aa16.68■□□□□ 0.26
COL9A3-210ENST00000472880 ASH2LQ9UBL3 628 aa16.68■□□□□ 0.26
COL9A3-210ENST00000472880 POLR1DQ9Y2S0 133 aa16.68■□□□□ 0.26
COL9A3-210ENST00000472880 STARD10Q9Y365 291 aa16.68■□□□□ 0.26
COL9A3-210ENST00000472880 PPIAL4EA0A075B759 164 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 PPIAL4CA0A0B4J2A2 164 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 PPIAL4DF5H284 164 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 SLC16A7O60669 478 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 FSHBP01225 129 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 H1F0P07305 194 aaKnown RBP16.67■□□□□ 0.26
COL9A3-210ENST00000472880 PPIAL4FP0DN26 164 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 NCK1P16333 377 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 NUDT2P50583 147 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 BTG1P62324 171 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 TMEM155Q4W5P6 130 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 ARMCX4Q5H9R4 360 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 Q6ZR03 302 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 ADCK1Q86TW2 530 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 GLB1L2Q8IW92 636 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 ZNF283Q8N7M2 679 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 ITLN1Q8WWA0 313 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 SLC7A6Q92536 515 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 RSRC1Q96IZ7 334 aaKnown RBP16.67■□□□□ 0.26
COL9A3-210ENST00000472880 GPX7Q96SL4 187 aaPredicted RBP16.67■□□□□ 0.26
COL9A3-210ENST00000472880 KRCC1Q9NPI7 259 aaPredicted RBP16.67■□□□□ 0.26
COL9A3-210ENST00000472880 IL19Q9UHD0 177 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 RPS6KA6Q9UK32 745 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 PPP1R3CQ9UQK1 317 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 SIGLEC7Q9Y286 467 aa16.67■□□□□ 0.26
COL9A3-210ENST00000472880 COA3Q9Y2R0 106 aaPredicted RBP16.67■□□□□ 0.26
COL9A3-210ENST00000472880 FAM32AQ9Y421 112 aaKnown RBP16.67■□□□□ 0.26
COL9A3-210ENST00000472880 A0A1W2PRQ8 180 aa16.66■□□□□ 0.26
COL9A3-210ENST00000472880 J3QW42 95 aa16.66■□□□□ 0.26
COL9A3-210ENST00000472880 SOCS2O14508 198 aa16.66■□□□□ 0.26
COL9A3-210ENST00000472880 ZFP36P26651 326 aaKnown RBP16.66■□□□□ 0.26
COL9A3-210ENST00000472880 LSM6P62312 80 aaKnown RBP16.66■□□□□ 0.26
COL9A3-210ENST00000472880 DGCR6Q14129 220 aa16.66■□□□□ 0.26
COL9A3-210ENST00000472880 OTPQ5XKR4 325 aa16.66■□□□□ 0.26
COL9A3-210ENST00000472880 C8orf82Q6P1X6 216 aaPredicted RBP16.66■□□□□ 0.26
COL9A3-210ENST00000472880 HACD2Q6Y1H2 254 aa16.66■□□□□ 0.26
COL9A3-210ENST00000472880 OR1F12Q8NHA8 337 aa16.66■□□□□ 0.26
COL9A3-210ENST00000472880 C22orf15Q8WYQ4 148 aa16.66■□□□□ 0.26
COL9A3-210ENST00000472880 POP5Q969H6 163 aaKnown RBP16.66■□□□□ 0.26
COL9A3-210ENST00000472880 HAVCR1Q96D42 359 aa16.66■□□□□ 0.26
COL9A3-210ENST00000472880 OR2V2Q96R30 315 aa16.66■□□□□ 0.26
COL9A3-210ENST00000472880 PATZ1Q9HBE1 687 aaKnown RBP16.66■□□□□ 0.26
COL9A3-210ENST00000472880 NRIP3Q9NQ35 241 aa16.66■□□□□ 0.26
COL9A3-210ENST00000472880 VSX1Q9NZR4 365 aaPredicted RBP16.66■□□□□ 0.26
COL9A3-210ENST00000472880 EGFL7Q9UHF1 273 aa16.66■□□□□ 0.26
COL9A3-210ENST00000472880 ATPIF1Q9UII2 106 aa16.66■□□□□ 0.26
COL9A3-210ENST00000472880 AURKCQ9UQB9 309 aa16.66■□□□□ 0.26
COL9A3-210ENST00000472880 DYSFO75923 2080 aa16.65■□□□□ 0.26
COL9A3-210ENST00000472880 OR6C6A6NF89 314 aa16.65■□□□□ 0.26
COL9A3-210ENST00000472880 RGS6P49758 472 aa16.65■□□□□ 0.26
COL9A3-210ENST00000472880 ERFP50548 548 aa16.65■□□□□ 0.26
COL9A3-210ENST00000472880 RBMS3Q6XE24 437 aaKnown RBP16.65■□□□□ 0.26
COL9A3-210ENST00000472880 TSEN54Q7Z6J9 526 aaKnown RBP16.65■□□□□ 0.26
COL9A3-210ENST00000472880 DEFB108BQ8NET1 73 aa16.65■□□□□ 0.26
COL9A3-210ENST00000472880 PTP4A1Q93096 173 aa16.65■□□□□ 0.26
COL9A3-210ENST00000472880 CMTM5Q96DZ9 223 aa16.65■□□□□ 0.26
COL9A3-210ENST00000472880 NTN4Q9HB63 628 aa16.65■□□□□ 0.26
COL9A3-210ENST00000472880 ESM1Q9NQ30 184 aa16.65■□□□□ 0.26
COL9A3-210ENST00000472880 DDX28Q9NUL7 540 aaKnown RBP16.65■□□□□ 0.26
COL9A3-210ENST00000472880 IL20RAQ9UHF4 553 aa16.65■□□□□ 0.26
COL9A3-210ENST00000472880 IER3IP1Q9Y5U9 82 aa16.65■□□□□ 0.26
COL9A3-210ENST00000472880 WNK2Q9Y3S1 2297 aa16.65■□□□□ 0.26
COL9A3-210ENST00000472880 RER1O15258 196 aa16.64■□□□□ 0.25
COL9A3-210ENST00000472880 PTP4A3O75365 173 aa16.64■□□□□ 0.25
COL9A3-210ENST00000472880 RAC2P15153 192 aa16.64■□□□□ 0.25
COL9A3-210ENST00000472880 RHCEP18577 417 aa16.64■□□□□ 0.25
COL9A3-210ENST00000472880 PRDX6P30041 224 aa16.64■□□□□ 0.25
COL9A3-210ENST00000472880 RBMXP38159 391 aaKnown RBP16.64■□□□□ 0.25
COL9A3-210ENST00000472880 OMPP47874 163 aa16.64■□□□□ 0.25
COL9A3-210ENST00000472880 RPS6KA3P51812 740 aa16.64■□□□□ 0.25
COL9A3-210ENST00000472880 ZMYND11Q15326 602 aa16.64■□□□□ 0.25
COL9A3-210ENST00000472880 CCDC92Q53HC0 331 aaPredicted RBP16.64■□□□□ 0.25
COL9A3-210ENST00000472880 PGM2L1Q6PCE3 622 aa16.64■□□□□ 0.25
COL9A3-210ENST00000472880 DNM1P34Q6PK57 102 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms