RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 TRAV8-7A0A075B6U6 113 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 IGHV3OR16-12A0A075B7B8 117 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 A0A0J9YYE9 177 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 A0A1B0GWB2 263 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 PRR23AA6NEV1 266 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 PDZK1P1A8MUH7 402 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 SHISA9B4DS77 424 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 TNFSF13O75888 250 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 FARS2O95363 451 aaKnown RBP2.09□□□□□ -2.08
XRN1-210ENST00000472697 TBX6O95947 436 aaPredicted RBP2.09□□□□□ -2.08
XRN1-210ENST00000472697 TRBC1P01850 177 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 HOXC4P09017 264 aaPredicted RBP2.09□□□□□ -2.08
XRN1-210ENST00000472697 PNMA6AP0CW24 399 aaPredicted RBP2.09□□□□□ -2.08
XRN1-210ENST00000472697 DAOP14920 347 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 IGHV1-2P23083 117 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 WARSP23381 471 aaKnown RBP2.09□□□□□ -2.08
XRN1-210ENST00000472697 PSMB5P28074 263 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 TIMP3P35625 211 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 ANP32AP39687 249 aaKnown RBP2.09□□□□□ -2.08
XRN1-210ENST00000472697 PPP1R2P41236 205 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 RPL29P47914 159 aaKnown RBP2.09□□□□□ -2.08
XRN1-210ENST00000472697 CX3CR1P49238 355 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 IFFO1Q0D2I5 559 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 C2orf80Q0P641 193 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 ZNF672Q499Z4 452 aaPredicted RBP2.09□□□□□ -2.08
XRN1-210ENST00000472697 PPP1R2P3Q6NXS1 205 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 ULK3Q6PHR2 472 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 C9orf47Q6ZRZ4 202 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 RFLNAQ6ZTI6 216 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 IFNEQ86WN2 208 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 ZBED8Q8IZ13 594 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 SLC22A18ASQ8N1D0 253 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 LRRC52Q8N7C0 313 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 OR4D10Q8NGI6 311 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 OR2G2Q8NGZ5 317 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 ANKRD7Q92527 254 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 TNFRSF14Q92956 283 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 CENPNQ96H22 339 aaPredicted RBP2.09□□□□□ -2.08
XRN1-210ENST00000472697 RNF170Q96K19 258 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 C18orf12Q96KH6 178 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 SERPINB12Q96P63 405 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 PGLYRP2Q96PD5 576 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 MRIQ9BWK5 157 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 MMP28Q9H239 520 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 ELL3Q9HB65 397 aaPredicted RBP2.09□□□□□ -2.08
XRN1-210ENST00000472697 ZC4H2Q9NQZ6 224 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 TMEM100Q9NV29 134 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 NLE1Q9NVX2 485 aaPredicted RBP2.09□□□□□ -2.08
XRN1-210ENST00000472697 CLN6Q9NWW5 311 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 THYN1Q9P016 225 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 SENP1Q9P0U3 644 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 ING4Q9UNL4 249 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 ATRXP46100 2492 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 CABIN1Q9Y6J0 2220 aa2.09□□□□□ -2.08
XRN1-210ENST00000472697 DENND4AQ7Z401 1863 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 TRBV7-9A0A0J9YWB2 115 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 IFITM10A6NMD0 228 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 E9PLD3 99 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 KLRC4-KLRK1H3BQV0 150 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 K7ENP7 123 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 PLEKP08567 350 aaPredicted RBP2.08□□□□□ -2.08
XRN1-210ENST00000472697 CFC1BP0CG36 223 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 PSMB6P28072 239 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 CHRNB4P30926 498 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 CALCRP30988 508 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 RBMXP38159 391 aaKnown RBP2.08□□□□□ -2.08
XRN1-210ENST00000472697 TSFMP43897 325 aaKnown RBP2.08□□□□□ -2.08
XRN1-210ENST00000472697 PSMC5P62195 406 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 MRPS11P82912 194 aaKnown RBP2.08□□□□□ -2.08
XRN1-210ENST00000472697 BNIP2Q12982 314 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 DYNC1I2Q13409 638 aaKnown RBP2.08□□□□□ -2.08
XRN1-210ENST00000472697 FASTKQ14296 549 aaKnown RBP2.08□□□□□ -2.08
XRN1-210ENST00000472697 EXOC3L4Q17RC7 722 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 MOGAT2Q3SYC2 334 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 ARMCX5Q6P1M9 558 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 LCLAT1Q6UWP7 414 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 NR2C2APQ86WQ0 139 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 SPAG16Q8N0X2 631 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 SYS1Q8N2H4 156 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 ABHD12Q8N2K0 398 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 RNF10Q8N5U6 811 aaKnown RBP2.08□□□□□ -2.08
XRN1-210ENST00000472697 IQCF1Q8N6M8 205 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 ZNF557Q8N988 423 aaPredicted RBP2.08□□□□□ -2.08
XRN1-210ENST00000472697 Q8NBF4 154 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 GTF2H4Q92759 462 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 C8orf76Q96K31 380 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 NODALQ96S42 347 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 RBBP8Q99708 897 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 CTRCQ99895 268 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 HCAR1Q9BXC0 346 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 WDR13Q9H1Z4 485 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 PPDPFQ9H3Y8 114 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 SMYD3Q9H7B4 428 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 FKRPQ9H9S5 495 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 PARVGQ9HBI0 331 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 CD209Q9NNX6 404 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 ZDHHC4Q9NPG8 344 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 IMP3Q9NV31 184 aaKnown RBP2.08□□□□□ -2.08
XRN1-210ENST00000472697 HRASLS2Q9NWW9 162 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 IFNKQ9P0W0 207 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms