RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 IGHV2-5P01817 119 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 IGHMP01871 453 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 HLA-HP01893 362 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 SHBGP04278 402 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 HIST1H2ABP04908 130 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 LCKP06239 509 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 GKN3PP0CG01 181 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 ZNF35P13682 527 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 ZNF250P15622 560 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 GSTM3P21266 225 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 AHCYP23526 432 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 PRTN3P24158 256 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 GRPRP30550 384 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 IL2RGP31785 369 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 IFNA8P32881 189 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 ACAA2P42765 397 aaKnown RBP2.97□□□□□ -1.93
XRN1-209ENST00000472625 ALDH3B1P43353 468 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 SLC1A6P48664 564 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 FOXG1P55316 489 aaPredicted RBP2.97□□□□□ -1.93
XRN1-209ENST00000472625 RGS8P57771 180 aaPredicted RBP2.97□□□□□ -1.93
XRN1-209ENST00000472625 PCBD1P61457 104 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 UBA52P62987 128 aaKnown RBP2.97□□□□□ -1.93
XRN1-209ENST00000472625 TUBA1BP68363 451 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 TUBA4AP68366 448 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 HSF2Q03933 536 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 ZP4Q12836 540 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 STX3Q13277 289 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 KLF9Q13886 244 aaPredicted RBP2.97□□□□□ -1.93
XRN1-209ENST00000472625 SEC23BQ15437 767 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 TAF11Q15544 211 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 TRIP10Q15642 601 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 ZNF718Q3SXZ3 478 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 KRT71Q3SY84 523 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 MTX3Q5HYI7 312 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 CEP78Q5JTW2 689 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 ELFN2Q5R3F8 820 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 GCNT6Q5T4J0 391 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 INTS11Q5TA45 600 aaKnown RBP2.97□□□□□ -1.93
XRN1-209ENST00000472625 FAM219BQ5XKK7 198 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 ZNF626Q68DY1 528 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 REEP3Q6NUK4 255 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 ZNF613Q6PF04 617 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 DHRS4L2Q6PKH6 230 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 BTNL3Q6UXE8 466 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 C17orf107Q6ZR85 190 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 TUBA1AQ71U36 451 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 HIST3H2AQ7L7L0 130 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 SLC16A14Q7RTX9 510 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 SERPINA11Q86U17 422 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 VRK2Q86Y07 508 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 CLEC4FQ8N1N0 589 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 SLC22A24Q8N4F4 322 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 C10orf53Q8N6V4 93 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 ZNF781Q8N8C0 355 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 NPEPL1Q8NDH3 523 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 OR5J2Q8NH18 312 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 OR6X1Q8NH79 312 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 SLC38A5Q8WUX1 472 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 HIST1H2ACQ93077 130 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 ZNF524Q96C55 264 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 SLC41A3Q96GZ6 507 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 SLC25A44Q96H78 314 aaPredicted RBP2.97□□□□□ -1.93
XRN1-209ENST00000472625 MPP4Q96JB8 637 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 SLC6A7Q99884 636 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 TMEM109Q9BVC6 243 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 POLR2J2Q9GZM3 115 aaKnown RBP2.97□□□□□ -1.93
XRN1-209ENST00000472625 SLITRK2Q9H156 845 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 POLR2J3Q9H1A7 115 aaKnown RBP2.97□□□□□ -1.93
XRN1-209ENST00000472625 RABEP2Q9H5N1 569 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 NARFLQ9H6Q4 476 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 RNF121Q9H920 327 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 NANOGQ9H9S0 305 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 ELOVL3Q9HB03 270 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 LPAR2Q9HBW0 351 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 SLCO1B3Q9NPD5 702 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 TCF7L2Q9NQB0 619 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 G6PC2Q9NQR9 355 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 NANSQ9NR45 359 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 SDR39U1Q9NRG7 319 aaPredicted RBP2.97□□□□□ -1.93
XRN1-209ENST00000472625 THAP1Q9NVV9 213 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 MED29Q9NX70 200 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 GAR1Q9NY12 217 aaKnown RBP2.97□□□□□ -1.93
XRN1-209ENST00000472625 B3GNT2Q9NY97 397 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 PLEK2Q9NYT0 353 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 GLTPQ9NZD2 209 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 TAAR3PQ9P1P4 343 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 SLC17A7Q9P2U7 560 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 B3GAT1Q9P2W7 334 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 GIMAP2Q9UG22 337 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 ZNF229Q9UJW7 825 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 NUP50Q9UKX7 468 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 LRCH1Q9Y2L9 728 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 FREM1Q5H8C1 2179 aa2.97□□□□□ -1.93
XRN1-209ENST00000472625 LOC105371242A0A075B767 164 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 LOC102723971A0A1B0GUV8 181 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 A0A1B0GWA3 101 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 TMEM129A0AVI4 362 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 NPIPB13A6NJU9 1138 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 LRRC30A6NM36 301 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 A8MXK9 166 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms