RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ZNF841Q6ZN19 808 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 ZNF620Q6ZNG0 422 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 HIST3H2AQ7L7L0 130 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 FITM2Q8N6M3 262 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 LRRC75AQ8NAA5 344 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 LIPHQ8WWY8 451 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 SLC7A6Q92536 515 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 HIST1H2ACQ93077 130 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 OR2V2Q96R30 315 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 TMEM246Q9BRR3 403 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 CDADC1Q9BWV3 514 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 SLC19A3Q9BZV2 496 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 SMURF2Q9HAU4 748 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 NOX4Q9NPH5 578 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 INIPQ9NRY2 104 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 IL19Q9UHD0 177 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 IL20RAQ9UHF4 553 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 SLC13A4Q9UKG4 626 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 PPP1R3CQ9UQK1 317 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 TIMM10BQ9Y5J6 103 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 USH1CQ9Y6N9 552 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 NOTCH3Q9UM47 2321 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 C22orf46C9J442 243 aa7.75□□□□□ -1.17
VCL-204ENST00000472585 H3BSA7 217 aa7.75□□□□□ -1.17
VCL-204ENST00000472585 FCN3O75636 299 aa7.75□□□□□ -1.17
VCL-204ENST00000472585 MAP2K3P46734 347 aa7.75□□□□□ -1.17
VCL-204ENST00000472585 RPL15P61313 204 aaKnown RBP7.75□□□□□ -1.17
VCL-204ENST00000472585 KPRPQ5T749 579 aaPredicted RBP7.75□□□□□ -1.17
VCL-204ENST00000472585 RUSC1-AS1Q66K80 236 aa7.75□□□□□ -1.17
VCL-204ENST00000472585 KLBQ86Z14 1044 aa7.75□□□□□ -1.17
VCL-204ENST00000472585 TMEM86BQ8N661 226 aa7.75□□□□□ -1.17
VCL-204ENST00000472585 LINC01006Q8NI28 216 aa7.75□□□□□ -1.17
VCL-204ENST00000472585 PPP1R14AQ96A00 147 aa7.75□□□□□ -1.17
VCL-204ENST00000472585 HAVCR1Q96D42 359 aa7.75□□□□□ -1.17
VCL-204ENST00000472585 MPP4Q96JB8 637 aa7.75□□□□□ -1.17
VCL-204ENST00000472585 FAM71F1Q96KD3 344 aaPredicted RBP7.75□□□□□ -1.17
VCL-204ENST00000472585 SSBP3Q9BWW4 388 aaPredicted RBP7.75□□□□□ -1.17
VCL-204ENST00000472585 PARD6BQ9BYG5 372 aa7.75□□□□□ -1.17
VCL-204ENST00000472585 KCNN2Q9H2S1 579 aa7.75□□□□□ -1.17
VCL-204ENST00000472585 TXNIPQ9H3M7 391 aa7.75□□□□□ -1.17
VCL-204ENST00000472585 EVA1AQ9H8M9 152 aa7.75□□□□□ -1.17
VCL-204ENST00000472585 EMC7Q9NPA0 242 aa7.75□□□□□ -1.17
VCL-204ENST00000472585 CGGBP1Q9UFW8 167 aaPredicted RBP7.75□□□□□ -1.17
VCL-204ENST00000472585 ANGPT4Q9Y264 503 aa7.75□□□□□ -1.17
VCL-204ENST00000472585 COL7A1Q02388 2944 aa7.75□□□□□ -1.17
VCL-204ENST00000472585 MCIDASD6RGH6 385 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 SFTPBP07988 381 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 MELTFP08582 738 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 ZNF26P17031 533 aaPredicted RBP7.74□□□□□ -1.17
VCL-204ENST00000472585 TNFRSF1AP19438 455 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 PPIBP23284 216 aaKnown RBP7.74□□□□□ -1.17
VCL-204ENST00000472585 DAP3P51398 398 aaKnown RBP7.74□□□□□ -1.17
VCL-204ENST00000472585 PROK1P58294 105 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 MTPNP58546 118 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 FGF12P61328 243 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 CD47Q08722 323 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 PIN1Q13526 163 aaPredicted RBP7.74□□□□□ -1.17
VCL-204ENST00000472585 TAF11Q15544 211 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 AGKQ53H12 422 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 TTMPQ5BVD1 217 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 SAMD5Q5TGI4 173 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 GPR157Q5UAW9 335 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 SLC27A4Q6P1M0 643 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 LYPD4Q6UWN0 246 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 IGFN1Q86VF2 1251 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 OR5AS1Q8N127 324 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 C11orf65Q8NCR3 313 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 C19orf18Q8NEA5 215 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 OR10AD1Q8NGE0 317 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 TBC1D15Q8TC07 691 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 SGCDQ92629 289 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 DYRK2Q92630 601 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 SGTBQ96EQ0 304 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 KAT8Q9H7Z6 458 aaKnown RBP7.74□□□□□ -1.17
VCL-204ENST00000472585 ELOVL3Q9HB03 270 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 POLE4Q9NR33 117 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 MAN2C1Q9NTJ4 1040 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 TBCCD1Q9NVR7 557 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.74□□□□□ -1.17
VCL-204ENST00000472585 RIMS3Q9UJD0 308 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 LRCH1Q9Y2L9 728 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 POMT1Q9Y6A1 747 aa7.74□□□□□ -1.17
VCL-204ENST00000472585 CENPVL3A0A0U1RRI6 287 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 NPIPB13A6NJU9 1138 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 EVPLLA8MZ36 301 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 NPIPB4C9JG80 1138 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 H7C1C5 153 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 IMPA2O14732 288 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 MLNRO43193 412 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 DBHP09172 617 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 MMP9P14780 707 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 OR1E2P47887 323 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 SLC18A1P54219 525 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 BPIFB3P59826 476 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 LCN6P62502 163 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 DBPQ10586 325 aaPredicted RBP7.73□□□□□ -1.17
VCL-204ENST00000472585 TOP3AQ13472 1001 aaPredicted RBP7.73□□□□□ -1.17
VCL-204ENST00000472585 RSPO1Q2MKA7 263 aaPredicted RBP7.73□□□□□ -1.17
VCL-204ENST00000472585 ZNF404Q494X3 552 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 OR2T2Q6IF00 324 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms